DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and mylka

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:XP_009302720.1 Gene:mylka / 569510 ZFINID:ZDB-GENE-030131-8207 Length:1857 Species:Danio rerio


Alignment Length:554 Identity:142/554 - (25%)
Similarity:228/554 - (41%) Gaps:105/554 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EPKSGTAASAAAAKASNNNNNNHPRGSGDSGIRS-------------GSGISCSNTDNSCSQSQS 54
            :|.:...|::...|:|...:...|...|.|.::|             ....||::|..:......
Zfish  1293 DPPARVPAASDIRKSSLTLSWYGPTYDGGSAVQSYNLEAWNSLDMKWTDVASCNSTSYNVQDLLP 1357

  Fly    55 DGQNELTRYSSEDVSG-NESSEAPNMTEVERQAELNRHKEEMQKK---------RRKKRISSSLH 109
            |.|.:. |..:.::.| .|.|......:|..:||....::|::..         .|...|.:.:.
Zfish  1358 DRQYKF-RVRAVNIYGVGEPSAESEPVQVGLEAEGENKEDEVEPSDDESEKVPDYRNVTIKTDVK 1421

  Fly   110 SSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDKIPGHARARVFREV---ETFHHCQ 171
            ...|.::    .:.||.|.:.:|...:...|...:|.|.|.......:..|.:|:   ...||.:
Zfish  1422 VKDFYDV----EDRLGTGKFGTVFKLIEKSTKKVWAGKFIKAYSAKEKENVRQEIAIMNDLHHPK 1482

  Fly   172 GHLGILQLIEFFEDDEKFYLVFEKINGGPLLSR-IQEHICFSEHEASQIIKEIASGLDFLHKKGI 235
                ::|.|:.||......:|.|.|:||.|..| |.|....:|.|..:.:.:|..|::|:|||||
Zfish  1483 ----LVQCIDAFEGKTDIVMVLEMISGGELFDRIIDEDFELTEREVIKYMLQIVDGVNFIHKKGI 1543

  Fly   236 AHRDLKPENILCV-KTDSLCPIKICDFDLGSGIKFTTDISSPAATPQLLTPVGSAEFMAPEVVDL 299
            .|.|||||||:|| ||.|  .||:.||.|...::....:.....||         ||:||||::.
Zfish  1544 VHLDLKPENIMCVNKTGS--KIKLIDFGLARRLENAGSLKVLFGTP---------EFVAPEVINY 1597

  Fly   300 FVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGHFSF 364
               ||..|  ..|:||:|||.|||:.|..||.|:       |..|.        ..::....:.|
Zfish  1598 ---EAISY--ATDMWSIGVICYILVSGLSPFMGD-------NDNET--------LSNVTSATWDF 1642

  Fly   365 PEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPASK--------------- 414
            .:..:.::|:||||.|||||.|....||:.:....|||::.......|.|               
Zfish  1643 EDEAFDEISEEAKDFISNLLKKDMKARLTCDQCFQHPWLKQDTTNMEAKKLSKERMKKYILRRKW 1707

  Fly   415 ----HGRR------HKALQTPSNIRRNHQSAREISQFAESAMAVKRVVLQHFSMRYDYMKERPNI 469
                |..|      :.||....:.:::..:..:..||| :.:..|.::...||   ..:|: ..:
Zfish  1708 QKTGHAVRAIGRLSNMALMAGVHAKKSSPTEADAKQFA-AELEAKTLMKPTFS---SVIKD-VEV 1767

  Fly   470 YQPSQAYMD----AYSDEN---YNPKPPGHYTRN 496
            .:.|.|..|    .|.|..   |....|...||:
Zfish  1768 VEGSAARFDCKIEGYPDPEVVWYKDDQPIKETRH 1801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 95/292 (33%)
S_TKc 117..403 CDD:214567 95/290 (33%)
mylkaXP_009302720.1 I-set 85..175 CDD:254352
Ig 91..165 CDD:299845
I-set 212..300 CDD:254352
Ig 231..301 CDD:299845
PHA03255 283..>461 CDD:165513
Ig 452..541 CDD:299845
I-set 453..542 CDD:254352
I-set 552..638 CDD:254352
IGc2 565..628 CDD:197706
I-set 661..750 CDD:254352
Ig 678..747 CDD:143165
I-set 759..848 CDD:254352
Ig 762..846 CDD:299845
I-set 1068..1157 CDD:254352
Ig 1087..1152 CDD:143165
Ig8_MLCK 1199..1296 CDD:143239 1/2 (50%)
I-set 1199..1288 CDD:254352
FN3 1292..1381 CDD:238020 17/88 (19%)
STKc_MLCK1 1423..1681 CDD:271093 96/296 (32%)
Pkinase 1426..1681 CDD:278497 95/293 (32%)
I-set 1756..1846 CDD:254352 12/50 (24%)
IGc2 1769..1836 CDD:197706 9/33 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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