DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and camk1a

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:XP_021332939.1 Gene:camk1a / 555945 ZFINID:ZDB-GENE-131120-147 Length:394 Species:Danio rerio


Alignment Length:415 Identity:126/415 - (30%)
Similarity:189/415 - (45%) Gaps:68/415 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 EILGEGAYASVQTCVNIYTDLEYAVKVIDK--IPGHARARVFREVETFHHCQGHLGILQLIEFFE 184
            |:||.||::.|.......|....|:|.|.|  :.|...: :..|:...|..: |..|:.|.:.||
Zfish    25 EVLGTGAFSEVFLAEEKKTQRLVAIKCIPKKALEGKENS-IENEIAVLHRIK-HENIVSLEDIFE 87

  Fly   185 DDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLHKKGIAHRDLKPENILCVK 249
            .....|||.:.::||.|..||.|...::|.:||::|::|...:.:||..||.||||||||:|...
Zfish    88 SQSHLYLVMQLVSGGELFDRIVEKGFYTERDASKLIRQILDAVKYLHDMGIVHRDLKPENLLYYS 152

  Fly   250 TDSLCPIKICDFDLGSGIKFTTDISSPAATPQLLTPVGSAEFMAPEVVDLFVGEAHYYDKRCDLW 314
            .:....|.|.||.| |.|:.:..:.|        |..|:..::||||:     ....|.|..|.|
Zfish   153 MEEDSNIMISDFGL-SKIEDSGSVMS--------TACGTPGYVAPEVL-----AQKPYSKAVDCW 203

  Fly   315 SLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGHFSFPEAEWHDVSDEAKDL 379
            |:|||:||||||||||           ..||    ...|||.|.:..:.|....|.|:||.|||.
Zfish   204 SIGVISYILLCGYPPF-----------YDEN----DAKLFEQILKAEYEFDSPYWDDISDSAKDF 253

  Fly   380 ISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPASKHGRRHKALQTPSNIRRNHQSAREISQFAES 444
            ||:|:.|..|.|.:.|..|.||||   ..:....|:  .|:::.  :.|::|...::....|..:
Zfish   254 ISHLMEKDPSLRYTCEQALLHPWI---SGDTALDKN--IHESVS--AQIKKNFAKSKWKQAFNAT 311

  Fly   445 AMAVKRVVLQHF-SMRYDYMKERPNIYQPSQAYM------------------DAYSDENYNPKPP 490
            |      |::|. .::.....|.|:....:..|.                  :...:||.:|...
Zfish   312 A------VVRHMRRLQLSTSLEGPSQITSTSPYRHLLLPAKELDQRDEEEEEEEEEEENGSPSVD 370

  Fly   491 GHYTRNRSQRNPASSLCGYGGRMSS 515
            |.  |..:.|:...| |.|..|.:|
Zfish   371 GR--RGSADRDSLRS-CAYCCRPTS 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 102/282 (36%)
S_TKc 117..403 CDD:214567 102/282 (36%)
camk1aXP_021332939.1 STKc_CaMKI 17..276 CDD:270985 101/281 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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