DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and pskh1

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001018546.1 Gene:pskh1 / 554840 ZFINID:ZDB-GENE-050119-1 Length:422 Species:Danio rerio


Alignment Length:573 Identity:145/573 - (25%)
Similarity:218/573 - (38%) Gaps:178/573 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PRGSGDSGIRSGSGISCSNTDNSCSQSQSDGQNELT-----RYSSEDVSGNESSEAPNMTEVERQ 85
            |...||..:.....:....||...:..:.||..|.|     :..|:.|:....|..|...:.|  
Zfish    10 PEPPGDVQLDLVKKVEPHQTDVYKNFIKYDGGGEKTGSPSPQGQSQAVAKVSQSPPPANDQPE-- 72

  Fly    86 AELNRHKEEMQKKRRK--KRISSSLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKV 148
             ..:.|::::.|.|.|  .|:::.         |.:.. ::|.|:::.|....:..|...||:|:
Zfish    73 -PADSHRKKVAKYRAKFDPRVTAK---------YDIKA-LIGRGSFSRVVRVEHRSTRQPYAIKM 126

  Fly   149 IDKIPGHARARVFREVETFHHCQG---------HLGILQLIEFFEDDEKFYLVFEKINGGPLLSR 204
            |:     .|.|..|||     |:.         |..|:||:|.||..|:.|:|.|...||.|..|
Zfish   127 IE-----TRYREGREV-----CESELCVLRRVRHTNIIQLMEVFETAERVYMVMELATGGELFDR 181

  Fly   205 IQEHICFSEHEASQIIKEIASGLDFLHKKGIAHRDLKPENILCVKTDSLCPIKICDFDLGSGIKF 269
            |.....|:|.:|:::::.:..|:.:||..||.||||||||:|.....:...|.|.||.|.|..|.
Zfish   182 IITRGSFTERDATRVLQMVLDGVKYLHTLGITHRDLKPENLLYYHPGADSKIMITDFGLASTRKK 246

  Fly   270 TTDISSPAATPQLLTPVGSAEFMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNC 334
            ..:.       .:.|..|:.|::|||::     ....|....|:|:||||:||||.|..||..: 
Zfish   247 GDEC-------LMKTTCGTPEYIAPEIL-----VRKPYTNAVDMWALGVISYILLSGTMPFEDD- 298

  Fly   335 GEDCGWNRGENCRTCQELLFESIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLN 399
                  ||..        |:..|.:|.:||....|..||:.|||.|..:|....:.||||...|.
Zfish   299 ------NRMR--------LYRQILKGKYSFSGEPWPSVSNLAKDFIDRVLTVDPNERLSAGQALK 349

  Fly   400 HPWIRMCEQEPPASKHGRRHKALQTPSNIRRNHQSAREISQFAESAMAVKRVVLQHFSMRYDYMK 464
            ||||                                  :|..|.|:|  |.:   |.|:..:.:|
Zfish   350 HPWI----------------------------------VSMAASSSM--KNL---HRSISQNLLK 375

  Fly   465 ERPNIYQPSQAYMDAYSDENYNPKPPGHYTRNRSQRNPASSLCGYGGRMSSMHGQRANSRRSSRN 529
            .                                     |||.|     .|:...|.|.|.||:::
Zfish   376 R-------------------------------------ASSRC-----HSTKSSQSARSSRSTKS 398

  Fly   530 ASRNASAIYPNSGGFKTLNVHEEDDDDEGLEAFGHIDDDDEWSRSRREYQQQC 582
            :              |...:.|:                 |.....|.|||||
Zfish   399 S--------------KARRLREK-----------------ELRELNRRYQQQC 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 97/296 (33%)
S_TKc 117..403 CDD:214567 97/294 (33%)
pskh1NP_001018546.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..80 10/47 (21%)
STKc_PSKH1 94..353 CDD:270989 97/305 (32%)
S_TKc 96..353 CDD:214567 97/294 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 376..422 19/118 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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