DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and camk2a

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001017741.2 Gene:camk2a / 550436 ZFINID:ZDB-GENE-051113-72 Length:478 Species:Danio rerio


Alignment Length:412 Identity:115/412 - (27%)
Similarity:185/412 - (44%) Gaps:83/412 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 SSLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVID--KIPGHARARVFREVETFH 168
            :::..:.|.|.|:|..| ||:||::.|:.||.:.:..|||.|:|:  |:......::.||...  
Zfish     2 ATITCTRFTEEYQLFEE-LGKGAFSVVRRCVKVLSGQEYAAKIINTKKLSTRDHQKLDREARI-- 63

  Fly   169 HCQ--GHLGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLH 231
             |:  .|..|::|.:...::...||:|:.:.||.|...|.....:||.:||..|::|...:...|
Zfish    64 -CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 127

  Fly   232 KKGIAHRDLKPENILCVKTDSLCPIKICDFDLGSGIK--------FTTDISSPAATPQLLTPVGS 288
            :.|:.||||||||:|.........:|:.||.|...::        |       |.||..|    |
Zfish   128 QMGVVHRDLKPENLLLASKSKGAAVKLADFGLAIEVEGEQQAWFGF-------AGTPGYL----S 181

  Fly   289 AEFMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELL 353
            .|.:..:.          |.|..|||:.|||.||||.|||||         |:..      |..|
Zfish   182 LEVLRKDP----------YGKAVDLWACGVILYILLVGYPPF---------WDED------QHRL 221

  Fly   354 FESIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPASKHGRR 418
            ::.|:.|.:.||..||..|:.||||||:.:|....|.|::|...|.||||              .
Zfish   222 YQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI--------------S 272

  Fly   419 HKALQTPSNIRRNHQSAREISQF-----AESAMAVKRVVLQHFS-MRYDYMKERPNIYQPSQAYM 477
            |::  |.::.....::...:.:|     .:.|:....:..::|| .:....|:...:.:.|::..
Zfish   273 HRS--TVASCMHRQETVECLKKFNARRKLKGAILTTMLATRNFSGGKSGVSKKTDGVKESSESTN 335

  Fly   478 DAYSDENYNPKPPGHYTRNRSQ 499
            ....||:         ||.|.|
Zfish   336 TTIEDED---------TRVRKQ 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 98/299 (33%)
S_TKc 117..403 CDD:214567 97/297 (33%)
camk2aNP_001017741.2 STKc_CaMKII 11..302 CDD:270988 103/346 (30%)
S_TKc 13..271 CDD:214567 97/297 (33%)
CaMKII_AD 346..473 CDD:285524 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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