DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and pskh1

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001017030.1 Gene:pskh1 / 549784 XenbaseID:XB-GENE-947381 Length:416 Species:Xenopus tropicalis


Alignment Length:432 Identity:126/432 - (29%)
Similarity:191/432 - (44%) Gaps:68/432 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 CSQSQSDGQNELTRYSSEDVSGNE--SSEAPN---MTEVERQAELNRHKEEMQKKRRKKRISSSL 108
            |...:||..|......|:....::  |...||   ...|| .|.|.|||....:.:...|:::. 
 Frog    27 CLDRKSDQYNNCITDKSQTFLKDDYLSHSLPNGDLKCHVE-SAHLRRHKIAKYRAKFDPRVTAK- 89

  Fly   109 HSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDKIPGHARARVFREVETFHHCQG- 172
                    |.:.. ::|.|:::.|....:..:...||:|:|:     .:.|..|||     |:. 
 Frog    90 --------YDIKA-LIGRGSFSRVVRVEHKASKQPYAIKMIE-----TKCREGREV-----CESE 135

  Fly   173 --------HLGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDF 229
                    |..|:||||.||..|:.|:|.|...||.|..||.....|:|.:|:.:::.:..|:.:
 Frog   136 LNVLRRVRHTNIIQLIEVFESQERVYMVMELATGGELFDRIITKGSFTERDATHVLQMVLEGVKY 200

  Fly   230 LHKKGIAHRDLKPENILCVKTDSLCPIKICDFDLGSGIKFTTDISSPAATPQLLTPVGSAEFMAP 294
            ||..||.||||||||:|.........|.|.||.|.|..|...|.       .:.|..|:.|::||
 Frog   201 LHALGITHRDLKPENLLYYHPGIDSKIMITDFGLASAQKKGDDC-------LMKTTCGTPEYIAP 258

  Fly   295 EVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQE 359
            ||:     ....|....|:|:||||:||||.|..||     ||....|          |:..|..
 Frog   259 EVL-----VRKPYTNSVDMWALGVISYILLSGTMPF-----EDDNRTR----------LYRQILR 303

  Fly   360 GHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWI-RMCEQEPPASKH-GRRHKAL 422
            |.:|:....|..||:.|||.|..||:.:...|::|...|.|||| .|.......:.| ......|
 Frog   304 GKYSYSGEPWPSVSNLAKDFIDRLLMVEPGQRMTATHALKHPWIVSMAASSSMKNLHRSISQNLL 368

  Fly   423 QTPSNIRRNHQSAREI----SQFAESAMAVKRVVLQHFSMRY 460
            :..|:..::.:|::.|    |..:..:..|:...|:..::||
 Frog   369 KRASSRCQSTKSSQSIHSSRSTKSSKSRRVRERELRELNLRY 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 97/296 (33%)
S_TKc 117..403 CDD:214567 97/294 (33%)
pskh1NP_001017030.1 STKc_PSKH1 88..347 CDD:270989 97/305 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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