DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and camk1

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001016269.1 Gene:camk1 / 549023 XenbaseID:XB-GENE-1017139 Length:383 Species:Xenopus tropicalis


Alignment Length:431 Identity:127/431 - (29%)
Similarity:192/431 - (44%) Gaps:90/431 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 KKRISSSLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDK--IPGHARA----- 158
            |||      :...:::|:.. |:||.||::.|.......|....|:|.|.|  :.|...:     
 Frog    11 KKR------AEDIRDIYEFR-EVLGTGAFSEVVLAEEKKTQKLVAIKCIPKKALEGKETSIENEI 68

  Fly   159 RVFREVETFHHCQGHLGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEI 223
            .|.|:::       |..|:.|.:.:|.....||:.:.::||.|..||.|...::|.:|||:||:|
 Frog    69 AVLRKIK-------HANIVSLEDIYESRSHLYLIMQLVSGGELFDRIVEKGFYTEKDASQLIKQI 126

  Fly   224 ASGLDFLHKKGIAHRDLKPENILCVKTDSLCPIKICDFDL----GSGIKFTTDISSPAATPQLLT 284
            ...:.:||..||.||||||||:|....|....|.|.||.|    |||...:|...:|.       
 Frog   127 LDAVKYLHDMGIVHRDLKPENLLYYSIDEDSKIMISDFGLSKIEGSGSVMSTACGTPG------- 184

  Fly   285 PVGSAEFMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTC 349
                  ::||||:     ....|.|..|.||:||||||||||||||           ..||    
 Frog   185 ------YVAPEVL-----AQKPYSKAVDCWSIGVIAYILLCGYPPF-----------YDEN---- 223

  Fly   350 QELLFESIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPASK 414
            ...|||.|.:..:.|....|.|:||.|||.|.:|:.|..:.|.:.:..|.||||   ..:....|
 Frog   224 DAKLFEQILKAEYEFDSPYWDDISDSAKDFIQHLMEKDPNKRNTCDQALQHPWI---AGDTALDK 285

  Fly   415 HGRRHKALQTPSNIRRNHQSAREISQFAESAMAVKRVVLQHF-SMRYDYMKERP----------- 467
            :  .|:::.  ..||:|...:|....|..:|      |::|. .::....:|.|           
 Frog   286 N--IHESVS--EQIRKNFAKSRWKQAFNATA------VVRHMRKLQLGTSQEGPGQTTPTSPCHG 340

  Fly   468 NIYQP-------SQAYMDAYSDENYNPKPPGHYTRNRSQRN 501
            |:..|       |::..|..|.::.......:.|::.:|.|
 Frog   341 NLLMPGDNHGSHSESCQDCCSPKSSENNSLAYSTQHCAQSN 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 102/298 (34%)
S_TKc 117..403 CDD:214567 102/296 (34%)
camk1NP_001016269.1 STKc_CaMKI_alpha 17..279 CDD:271069 104/305 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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