DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and camk2d2

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:XP_009304932.1 Gene:camk2d2 / 436815 ZFINID:ZDB-GENE-040718-277 Length:554 Species:Danio rerio


Alignment Length:644 Identity:163/644 - (25%)
Similarity:260/644 - (40%) Gaps:143/644 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 FQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVID--KIPGHARARVFREVETFHHCQ--GH 173
            |.:.|:|..| ||:||::.|:.||.|.:..|||.|:|:  |:......::.||...   |:  .|
Zfish     9 FTDEYQLFEE-LGKGAFSVVRRCVKISSGQEYAAKIINTKKLSARDHQKLEREARI---CRLLKH 69

  Fly   174 LGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLHKKGIAHR 238
            ..|::|.:...::...||||:.:.||.|...|.....:||.:||..|::|...:...|..||.||
Zfish    70 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVHHCHVNGIVHR 134

  Fly   239 DLKPENILCVKTDSLCPIKICDFDLGSGIKFTTDISS---PAATPQLLTPVGSAEFMAPEVVDLF 300
            ||||||:|.........:|:.||  |..|:...|..:   .|.||         .:::|||:   
Zfish   135 DLKPENLLLASKMKGAAVKLADF--GLAIEVQGDQQAWFGFAGTP---------GYLSPEVL--- 185

  Fly   301 VGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGHFSFP 365
              ....|.|..|:|:.|||.||||.|||||         |:..      |..|::.|:.|.:.||
Zfish   186 --RKDPYGKPVDMWACGVILYILLVGYPPF---------WDED------QHRLYQQIKAGAYDFP 233

  Fly   366 EAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPAS-KHGRRHKALQTPSNIR 429
            ..||..|:.||||||:.:|....|.|::|...|.||||  |::...|| .|.:.........|.|
Zfish   234 SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI--CQRSTVASMMHRQETVECLKKFNAR 296

  Fly   430 RNHQSAREISQFAESAMAVKRVVLQHFSMRYDYMKERPNIYQPSQAYMDAYSDENYNPKPPGHYT 494
            |.          .:.|:....:|.::||.....:.::|:..:.:.....|.|.::..|.|     
Zfish   297 RK----------LKGAILTTLLVTRNFSAAKSLLNKKPDGVKVNNKTNLASSPKDTGPAP----- 346

  Fly   495 RNRSQRNPASSLCGYGGRMSSMHGQRANSRRSSRNASRNASAIYPNSGGFKTLNVHEEDDDDEGL 559
                ...|.:::         :|.....::.|:.:|:...                    :||.|
Zfish   347 ----ALEPQTTV---------IHNPVDRNKESTESANTTI--------------------EDEDL 378

  Fly   560 EA--FGHIDDDDEWSRSRREYQ------------QQCETLGEDRFRRQSGSEGDE--VEDDEDGE 608
            :|  ||::..:..|..|....|            |.|:.:  ::.|:|...:..|  :|...:|:
Zfish   379 KARRFGNLSINSIWQPSVGRPQNSEPKQAPNSSVQTCQVI--NKARKQEIIKVTEQLIESINNGD 441

  Fly   609 NEDYQHYKHYWRELDEEEGDDYLYEQQQRVDDKFGEEEFEDEPKEETQADNLKLSKAYVEQVGET 673
            .|.|...........|.|....|.|...     |....||:...:..:..:..|...:|..:|| 
Zfish   442 FEAYAKICDPGLTSFEPEALGNLVEGHD-----FHRFYFENALSKGNKPVHTILLNPHVHLIGE- 500

  Fly   674 NVEKSKPQDDNG--GYIREDLIMDNMDMKKNTQQSEFAKLTIMRNDAQTEENKIMQQQD 730
                     |..  .|||....||...|.:.               .|:||.::..::|
Zfish   501 ---------DAACIAYIRLTQYMDGSGMPRT---------------MQSEETRVWHRRD 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 100/294 (34%)
S_TKc 117..403 CDD:214567 100/292 (34%)
camk2d2XP_009304932.1 STKc_CaMKII 11..302 CDD:270988 109/337 (32%)
S_TKc 13..271 CDD:214567 100/292 (34%)
CaMKII_AD 422..549 CDD:285524 29/144 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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