DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and camk1gb

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:XP_021325441.1 Gene:camk1gb / 393802 ZFINID:ZDB-GENE-040426-1694 Length:486 Species:Danio rerio


Alignment Length:540 Identity:135/540 - (25%)
Similarity:208/540 - (38%) Gaps:149/540 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 CSNTDNSCSQSQSDGQNELTRYSSEDVSGNESSEAPNMTEVERQAELNRHKEEMQKKRRKKRISS 106
            |...|:.|.:.:|..                |...|....||..||:.|.:.|.:.|:....|  
Zfish    24 CLRLDSFCKRQKSCW----------------SCYRPEEIPVEAHAEMGRKEGEYEWKKSTDNI-- 70

  Fly   107 SLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDK-----IPGHARARVFREVET 166
                   |:::... ::||.||::.|.......|...:|:|.:.|     |.......|.|::: 
Zfish    71 -------QDVFDFM-DVLGSGAFSEVFMVKERKTGKLFAMKCVKKKNKRDINLENEIAVLRKIK- 126

  Fly   167 FHHCQGHLGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLH 231
                  |..::.|.:|:|....:|||.:.::||.|..||.:...:||.:||.:|:::...:.:||
Zfish   127 ------HENVVCLEDFYESRTHYYLVMQLVSGGELFDRILDRGMYSEMDASSVIRQVLEAVSYLH 185

  Fly   232 KKGIAHRDLKPENILCVKTDSLCPIKICDFDLG----SGIKFTTDISSPAATPQLLTPVGSAEFM 292
            ..||.||||||||:|....|....|.|.||.|.    :|:              :.|..|:..::
Zfish   186 NNGIVHRDLKPENLLYYSPDENSKIMISDFGLSKMEDNGV--------------MSTACGTPGYV 236

  Fly   293 APEVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESI 357
            ||||:     ....|.|..|.||:|||.||||||||||.            |...|   .||..|
Zfish   237 APEVL-----AQKPYSKAVDCWSIGVITYILLCGYPPFY------------EETET---RLFSKI 281

  Fly   358 QEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWI---------------RMCE 407
            .:|.:.|....|.|:|:.|||.|.|::.|....|.:.|..|.||||               ...:
Zfish   282 MKGQYEFDSPFWDDISESAKDFIRNMMQKNPKMRFNTEQALRHPWIIGKTARSQDIYHSVSEQMQ 346

  Fly   408 QEPPASKHGRRHKALQTPSNIRRNHQ-----------SAREISQFAESAMAVKRVVLQHFSMRYD 461
            :....||..:...|....:::::..|           |.|::.:....|.:...      |:|..
Zfish   347 KNFAKSKWKQAFNATVAINHMKKLQQAHSEACVRLKDSPRDVPEIKVIASSTPE------SVRKK 405

  Fly   462 YMKERPNIYQPSQAYMDAYSDENYNPKPPGHYTRNRSQRNP------------------------ 502
            .:.|.|              :.|.:...|...|..:||.:|                        
Zfish   406 LLSETP--------------EPNGSMNVPCGSTEAKSQYHPMRVSHSETTHVGTLTIAEKGKHVY 456

  Fly   503 ---ASSLCGYGGRMSSMHGQ 519
               .:.|.||..|.|:..||
Zfish   457 HSEPADLNGYAKRSSNRPGQ 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 94/296 (32%)
S_TKc 117..403 CDD:214567 94/294 (32%)
camk1gbXP_021325441.1 PKc_like 70..353 CDD:328722 98/333 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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