DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and camkvb

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_956744.1 Gene:camkvb / 393422 ZFINID:ZDB-GENE-040426-1140 Length:436 Species:Danio rerio


Alignment Length:368 Identity:100/368 - (27%)
Similarity:162/368 - (44%) Gaps:65/368 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 KKRISSSLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDKIPGHARAR--VFRE 163
            |..:...:.|..|.|:::           |..:..:.:||..::..|...|:...|:..  :.:.
Zfish    23 KYDLGQIVKSEEFCEIFR-----------AKDKNTLKMYTCKKFLKKDGRKVRKAAKNEIVILKM 76

  Fly   164 VETFHHCQGHLGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLD 228
            |:       |..||||::.:|..:::||..|...|..:...|.:...:||.:.|.:|:::...:.
Zfish    77 VK-------HPNILQLVDVYETRKEYYLFLELATGREVFDWILDQGYYSERDTSNVIRQVMEAVA 134

  Fly   229 FLHKKGIAHRDLKPENILCVKTDSLCPIKICDFDLG---SGIKFTTDISSPAATPQLLTPVGSAE 290
            :||...|.||:||.||::.........|.|.||.|.   :|:     |..|..||         |
Zfish   135 YLHSLKIVHRNLKLENLVYYNRLKHSKIVISDFHLAKLENGL-----IKEPCGTP---------E 185

  Fly   291 FMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFE 355
            ::|||||.     ...|.:..|.|:||||.||||.|.|||.....:|...|..:|       ||.
Zfish   186 YLAPEVVG-----RQRYGRPVDCWALGVIMYILLSGNPPFYDEADDDDYENHDKN-------LFR 238

  Fly   356 SIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWI------------RMCEQ 408
            .|..|.:.|....|.::||.||:|:|.|:......||:|:..:||.||            .:|.|
Zfish   239 KILAGDYEFDSPYWDEISDSAKNLVSRLMEVDQDQRLTAQEAINHEWISGNAASDKNIKENVCAQ 303

  Fly   409 EPPASKHGRRHKALQTPSNIRR----NHQSAREISQFAESAMA 447
            ........:..||::..:.::|    .:|:|...:..||:|.|
Zfish   304 IEKNFAKAKWKKAVRVTTMMKRLRAPENQTAAATAPAAEAAAA 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 84/292 (29%)
S_TKc 117..403 CDD:214567 83/290 (29%)
camkvbNP_956744.1 STKc_CaMK_like 22..286 CDD:270990 87/306 (28%)
S_TKc 24..286 CDD:214567 86/305 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..436 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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