DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lk6 and Dclk3

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_766516.2 Gene:Dclk3 / 245038 MGIID:3039580 Length:790 Species:Mus musculus


Alignment Length:429 Identity:122/429 - (28%)
Similarity:192/429 - (44%) Gaps:68/429 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NNNNNNHPRGS---------GDSGIRSGSGISCSNTDNSCSQS---------QSDGQNELTRYSS 65
            :.:.::||:|:         |...:..|. |.....|....:|         |.....:|.|...
Mouse   396 SESQDSHPQGAPKAQKDLVEGPPAVEEGP-IDMRREDRHTCRSKHAAWLRREQQAEPPQLPRTRG 459

  Fly    66 EDVSGNESSEAPNMTEVERQAELNRHKEEMQKKR------RKKRISSSLHSSTFQELYKLTGEIL 124
            |:.......:...:.  ||:|.....|.::::||      ||.| ...:.|:..::.|.: |.::
Mouse   460 EEKQAEHEKKPGGLG--ERRAPEKESKRKLEEKRPERPSGRKPR-PKGIISADVEKHYDI-GGVI 520

  Fly   125 GEGAYASVQTCVNIYTDLEYAVKVIDKIPGHARARVFREVETFHHCQGHLGILQLIEFFEDDEKF 189
            |:|.:|:|:.|.:..|...||:|:|||.....:..:............|..|::|.|.:|.:.:.
Mouse   521 GDGNFATVKECRHRETKQAYAMKMIDKSQLKGKEDIVDSEILIIQSLSHPNIVKLHEVYETEAEI 585

  Fly   190 YLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLHKKGIAHRDLKPENILCVKT-DSL 253
            ||:.|.:.||.|...|.|::.|.|.||:.:|.::...|..:|.|.|.|||:||||:|..:. |..
Mouse   586 YLIMEYVQGGDLFDAIVENVKFPEPEAAVMITDLCKALVHMHDKNIVHRDVKPENLLVQRNEDKS 650

  Fly   254 CPIKICDFDLGSGIKFTTDISSPAATPQLLTPVGSAEFMAPEVVDLFVGEAHYYDKRCDLWSLGV 318
            ..:|:.||.|...:           ...:.|..|:..::|||::     ....|....|:|:.||
Mouse   651 ITLKLADFGLAKYV-----------VRPIFTVCGTPTYVAPEIL-----SEKGYGLEVDMWAAGV 699

  Fly   319 IAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGHFSFPEAEWHDVSDEAKDLISNL 383
            |.||||||:|||             .:....|:.||..||.|.|.|....|.::||.||||:.||
Mouse   700 ILYILLCGFPPF-------------RSPERDQDELFNIIQVGQFEFLSPYWDNISDAAKDLVRNL 751

  Fly   384 LVKKASNRLSAEAVLNHPWIRMC---------EQEPPAS 413
            |......|.:||.||.||||.|.         ::|.|.|
Mouse   752 LEVDPKKRYTAEQVLQHPWIEMVGHTNTGNSQKEESPNS 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 94/288 (33%)
S_TKc 117..403 CDD:214567 94/286 (33%)
Dclk3NP_766516.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
UBQ 92..177 CDD:294102
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..290
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 315..506 21/113 (19%)
PKc_like 513..770 CDD:304357 93/286 (33%)
S_TKc 514..771 CDD:214567 94/286 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.