DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and Pskh1

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_775608.1 Gene:Pskh1 / 244631 MGIID:3528383 Length:424 Species:Mus musculus


Alignment Length:402 Identity:118/402 - (29%)
Similarity:178/402 - (44%) Gaps:62/402 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 NESSEAPNMTEVERQAELNRHKEEMQKKRRKKRISSSLHSSTFQELYKLTGEILGEGAYASVQTC 135
            |....|| .:|..|:|.:.:::.:...:...|              |.:.. ::|.|:::.|...
Mouse    67 NTGHTAP-PSEPPRRARVAKYRAKFDPRVTAK--------------YDIKA-LIGRGSFSRVVRV 115

  Fly   136 VNIYTDLEYAVKVIDKIPGHAR------ARVFREVETFHHCQGHLGILQLIEFFEDDEKFYLVFE 194
            .:..|...||:|:|:......|      .||.|.|.       |..|:||:|.||..|:.|:|.|
Mouse   116 EHRATRQPYAIKMIETKYREGREVCESELRVLRRVR-------HANIIQLVEVFETQERVYMVME 173

  Fly   195 KINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLHKKGIAHRDLKPENILCVKTDSLCPIKIC 259
            ...||.|..||.....|:|.:|:::::.:..|:.:||..||.||||||||:|.....:...|.|.
Mouse   174 LATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALGITHRDLKPENLLYYHPGTDSKIIIT 238

  Fly   260 DFDLGSGIKFTTDISSPAATPQLLTPVGSAEFMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILL 324
            ||.|.|..|...|.       .:.|..|:.|::||||:     ....|....|:|:|||||||||
Mouse   239 DFGLASARKKGDDC-------LMKTTCGTPEYIAPEVL-----VRKPYTNSVDMWALGVIAYILL 291

  Fly   325 CGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKAS 389
            .|..||     ||....|          |:..|..|.:|:....|..||:.|||.|..||.....
Mouse   292 SGTMPF-----EDDNRTR----------LYRQILRGKYSYLGEPWPSVSNLAKDFIDRLLTVDPG 341

  Fly   390 NRLSAEAVLNHPW-IRMCEQEPPASKHGRRHKALQTPSNIR----RNHQSAREI-SQFAESAMAV 448
            .|::|...|.||| :.|.......:.|....:.|...::.|    ::.||.|.. |..:..:..|
Mouse   342 ARMTALQALRHPWVVSMAASSSMKNLHRSISQNLLKRASSRCQSTKSSQSTRSSRSTRSNKSRRV 406

  Fly   449 KRVVLQHFSMRY 460
            :...|:..::||
Mouse   407 RERELRELNLRY 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 99/294 (34%)
S_TKc 117..403 CDD:214567 99/292 (34%)
Pskh1NP_775608.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..79 4/12 (33%)
STKc_PSKH1 96..355 CDD:270989 99/307 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..408 6/29 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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