DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and unc-43

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001255480.1 Gene:unc-43 / 177921 WormBaseID:WBGene00006779 Length:681 Species:Caenorhabditis elegans


Alignment Length:589 Identity:157/589 - (26%)
Similarity:246/589 - (41%) Gaps:143/589 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ISCSNTDNSCSQSQSDGQNELTRYSSEDVSGNESSEAP-NMTEVERQAELNRHK---EEM---QK 97
            :|.|:|::..:..|::..:....:.:.....|.|...| |.|.   ::|:::.|   ||.   :|
 Worm     1 MSNSSTNSEVNIDQNNQSDTFREHPAVTGIANLSKVGPKNHTP---RSEISKRKWASEECYIGEK 62

  Fly    98 KRRKKRISSSL------------------------------H----------SSTFQELYKLTGE 122
            ::|..:|.|:|                              |          |:.|.:.|.:..|
 Worm    63 RQRATQIQSNLLTQLQEGSSNYHHQQYRPPLPLLPPPTVDQHYLQQLAMMNASTKFSDNYDVKEE 127

  Fly   123 ILGEGAYASVQTCVNIYTDLEYAVKVIDKIPGHAR--------ARVFREVETFHHCQGHLGILQL 179
             ||:||::.|:.||:..|.||:|.|:|:.....||        ||:.|:::       |..|::|
 Worm   128 -LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-------HPNIVRL 184

  Fly   180 IEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLHKKGIAHRDLKPEN 244
            .:..:::...||||:.:.||.|...|.....:||.:||..|::|...:.:.|..||.||||||||
 Worm   185 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRDLKPEN 249

  Fly   245 ILCVKTDSLCPIKICDFDLGSGIKFTTDISSPAATPQLLTPVGSAEFMAPEVVDLFVGEAHYYDK 309
            :|.........:|:.||.|...:..:......|.||         .:::|||:     :...|.|
 Worm   250 LLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP---------GYLSPEVL-----KKDPYSK 300

  Fly   310 RCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGHFSFPEAEWHDVSD 374
            ..|:|:.|||.||||.|||||         |:..      |..|:..|:.|.:.:|..||..|:.
 Worm   301 PVDIWACGVILYILLVGYPPF---------WDED------QHRLYAQIKAGAYDYPSPEWDTVTP 350

  Fly   375 EAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPASK-HGRRHKALQTPSNIRRNHQSAREI 438
            |||.||.::|......|::|:..|..|||  |.:|..||. |.:.........|.||..::|  |
 Worm   351 EAKSLIDSMLTVNPKKRITADQALKVPWI--CNRERVASAIHRQDTVDCLKKFNARRKLKAA--I 411

  Fly   439 SQFAESAMAVKRVVLQHFSMRYDYMKERPNIYQPSQAYMDAYSDENYNPKPPGHYTRNRSQRNPA 503
            |       |||.|......:|                    .||..      |....|.|..:.|
 Worm   412 S-------AVKMVTRMSGVLR--------------------TSDST------GSVASNGSTTHDA 443

  Fly   504 SSLCGYGGRMSSMHGQRANSRRSSRNASRNASAIYPNSGGFKTLNVHEEDDDD---EGLEAFGHI 565
            |.:.|...:.:|...:.|  ..::..|:||.|.:     |...||..|:....   |..|:...|
 Worm   444 SQVAGTSSQPTSPAAEGA--ILTTMIATRNLSNL-----GRNLLNKKEQGPPSTIKESSESSQTI 501

  Fly   566 DDDD 569
            ||:|
 Worm   502 DDND 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 94/295 (32%)
S_TKc 117..403 CDD:214567 94/293 (32%)
unc-43NP_001255480.1 STKc_CaMKII 120..410 CDD:270988 104/328 (32%)
CaMKII_AD 548..672 CDD:285524
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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