DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and cmk-1

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_500139.1 Gene:cmk-1 / 176989 WormBaseID:WBGene00000553 Length:348 Species:Caenorhabditis elegans


Alignment Length:404 Identity:115/404 - (28%)
Similarity:183/404 - (45%) Gaps:70/404 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 KRRKKRISSSLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDL--EYAVKVIDK--IPGHARA 158
            |||..  |....::|.:|.|... ::||.||::.| ......:|.  .||||.|||  :.|...:
 Worm     5 KRRDG--SGPAPNATIREKYDFR-DVLGTGAFSKV-FLAESKSDAGQMYAVKCIDKKALKGKEES 65

  Fly   159 -----RVFREVETFHHCQGHLGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQ 218
                 :|.|::.       |..|:||.:.:::.:..|||.|.:.||.|..||.....::|.:||.
 Worm    66 LENEIKVLRKLR-------HNNIVQLFDTYDEKQFVYLVMELVTGGELFDRIVAKGSYTEQDASN 123

  Fly   219 IIKEIASGLDFLHKKGIAHRDLKPENILCVKTDSLCPIKICDFDLGSGIKFTTDISSPAATPQLL 283
            :|:::...:.|:|..|:.||||||||:|....|....|.|.||    |:..|.|      :..:.
 Worm   124 LIRQVLEAVGFMHDNGVVHRDLKPENLLYYNQDEDSKIMISDF----GLSKTED------SGVMA 178

  Fly   284 TPVGSAEFMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRT 348
            |..|:..::||||:     :...|.|..|:||:||||||||||||||......:           
 Worm   179 TACGTPGYVAPEVL-----QQKPYGKAVDVWSIGVIAYILLCGYPPFYDESDAN----------- 227

  Fly   349 CQELLFESIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPAS 413
                ||..|.:|.:.|....|..:||.|||.|::|:......|.:.:..|:||||        :.
 Worm   228 ----LFAQIIKGEYEFDAPYWDQISDSAKDFITHLMCCDPEARFTCQDALSHPWI--------SG 280

  Fly   414 KHGRRHKALQTPSNIRRNHQSAREISQFAESAMAVKRVVLQHFSMRYDYMKERPNIYQPSQAYMD 478
            .....|....|.:...:...:.|...:...:|.|::::.:...|...:.::::.:..||..    
 Worm   281 NTAYTHDIHGTVAVHLKKSLAKRNWKKAYNAAAAIRQLQMLRLSSNSNRLQKQASQQQPEP---- 341

  Fly   479 AYSDENYNPKPPGH 492
                    |.|..|
 Worm   342 --------PTPAFH 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 97/296 (33%)
S_TKc 117..403 CDD:214567 96/294 (33%)
cmk-1NP_500139.1 STKc_CaMKI 18..277 CDD:270985 96/297 (32%)
S_TKc 22..278 CDD:214567 96/294 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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