DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lk6 and Camk4

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:XP_006525606.1 Gene:Camk4 / 12326 MGIID:88258 Length:497 Species:Mus musculus


Alignment Length:645 Identity:157/645 - (24%)
Similarity:237/645 - (36%) Gaps:182/645 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ISCSNTDNSCSQSQSDGQNELTRYSSEDVSGNESSEAPNMTEVERQAELNRHKEEMQKKRRKKRI 104
            :||:|.|.:.:...|.|...:.|           |.|..|.:|...:             .....
Mouse     1 MSCANNDQAAAGGSSSGSGGVFR-----------SPAAKMLKVTVPS-------------CPSSP 41

  Fly   105 SSSLHSST----------------FQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDKIP 153
            .||:.:||                ..:.:::..| ||.||.:.|..|....|...||:||:.|..
Mouse    42 CSSVTASTENLVPDYWIDGSNRDPLGDFFEVESE-LGRGATSIVYRCKQKGTQKPYALKVLKKTV 105

  Fly   154 GHARARVFREVETFHHCQGHLGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQ 218
            .....|.  |:...... .|..|::|.|.||...:..||.|.:.||.|..||.|...:||.:|:.
Mouse   106 DKKIVRT--EIGVLLRL-SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAAD 167

  Fly   219 IIKEIASGLDFLHKKGIAHRDLKPENILCVKTDSLCPIKICDFDLGSGIKFTTDISSPAATPQLL 283
            .:|:|...:.:||:.||.||||||||:|........|:||.||.|...::....:.:...||   
Mouse   168 AVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTP--- 229

  Fly   284 TPVGSAEFMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRT 348
                  .:.|||::     ....|....|:||:|:|.||||||:.||....|:...:.|..||  
Mouse   230 ------GYCAPEIL-----RGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC-- 281

  Fly   349 CQELLFESIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPAS 413
                      |.:|..|  .|.:||..||||:..|:|.....||:....|.|||:          
Mouse   282 ----------EYYFISP--WWDEVSLNAKDLVKKLIVLDPKKRLTTFQALQHPWV---------- 324

  Fly   414 KHGRRHKALQTPSNIRRNHQSAREISQFAESAMAVKRVVLQHFSMRYDYMKERPNIYQPSQAYMD 478
                                 ..:.:.|.....|.|:  ||.|:.|           :..:|.:.
Mouse   325 ---------------------TGKAANFVHMDTAQKK--LQEFNAR-----------RKLKAAVK 355

  Fly   479 AYSDENYNPKPPGHYTRNRSQRNPASSLCGYGGRMSSMHGQRANSRRSSRNASRNASAIYPNSGG 543
            |.                     .|||..|           .|:|..:|...:..||:..|::..
Mouse   356 AV---------------------VASSRLG-----------SASSSHTSIQENHKASSDPPSTQD 388

  Fly   544 FKT------LNVHEEDDDDEGLEAFGHIDDDDEWSRSRREYQQQCETLGEDRFRRQSGSEGDEVE 602
            .|.      ..:.|||.:::.:||....|:       .|:.|                  .:|||
Mouse   389 AKDSTDLLGKKMQEEDQEEDQVEAEASADE-------MRKLQ------------------SEEVE 428

  Fly   603 DDEDGENEDYQHYKHYWRELDEEEGDDYLYEQQQRVDDKFGEEEFEDEPKEETQADNLKL 662
            .|...:.|:.........| ||.|.||  .|.::..::|....|.|.:|..|.:|.:..|
Mouse   429 KDAGVKEEETSSMVPQDPE-DELETDD--PEMKRDSEEKLKSVEEEMDPMTEEEAPDAGL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 94/287 (33%)
S_TKc 117..403 CDD:214567 94/285 (33%)
Camk4XP_006525606.1 STKc_CaMKIV 66..359 CDD:270987 104/389 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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