DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and Mylk

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_647461.3 Gene:Mylk / 107589 MGIID:894806 Length:1950 Species:Mus musculus


Alignment Length:613 Identity:147/613 - (23%)
Similarity:255/613 - (41%) Gaps:155/613 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 NSCSQSQSDGQNELTRYSSEDVSGNESSEAPNMTEV----ERQAELNRHKEEMQKKRR------- 100
            |....|:...::|||      ..|.:..|..:..||    |::.|::.....:..:::       
Mouse  1439 NVYGTSEPSQESELT------AVGEKPEEPKDEVEVSDDDEKEPEVDYRTVTVNTEQKVSDVYDI 1497

  Fly   101 KKRISSSLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDKIPGHARARVFREVE 165
            ::|:.|......|:.:.|.||:|.....:.:            |:.|..|.|         |:..
Mouse  1498 EERLGSGKFGQVFRLVEKKTGKIWAGKFFKA------------YSAKEKDNI---------RQEI 1541

  Fly   166 TFHHCQGHLGILQLIEFFEDDEKFYLVFEKINGGPLLSR-IQEHICFSEHEASQIIKEIASGLDF 229
            :..:|..|..::|.::.||:.....:|.|.::||.|..| |.|....:|.|..:.:::|:.|:::
Mouse  1542 SIMNCLHHPKLVQCVDAFEEKANIVMVLEIVSGGELFERIIDEDFELTERECIKYMRQISEGVEY 1606

  Fly   230 LHKKGIAHRDLKPENILCV-KTDSLCPIKICDFDLGSGIKFTTDISSPAATPQLLTPVGSAEFMA 293
            :||:||.|.|||||||:|| ||.:  .||:.||.|...::....:.....||         ||:|
Mouse  1607 IHKQGIVHLDLKPENIMCVNKTGT--RIKLIDFGLARRLENAGSLKVLFGTP---------EFVA 1660

  Fly   294 PEVVDLF-VGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESI 357
            |||::.. :|.|      .|:||:|||.|||:.|..||.|:       |..|.        ..::
Mouse  1661 PEVINYEPIGYA------TDMWSIGVICYILVSGLSPFMGD-------NDNET--------LANV 1704

  Fly   358 QEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPASKHGR-RHKA 421
            ....:.|.:..:.::||:|||.|||||.|...|||.....|.|||:....:...|.|..: |.|.
Mouse  1705 TSATWDFDDEAFDEISDDAKDFISNLLKKDMKNRLDCTQCLQHPWLMKDTKNMEAKKLSKDRMKK 1769

  Fly   422 LQTPSNIRRNHQSAREISQFAESAMAVKRVVLQHFSMR------------YDYMKERPNIYQPSQ 474
            .......::...:.|.|.:.:..||      :...|.|            .:.::...::   ||
Mouse  1770 YMARRKWQKTGNAVRAIGRLSSMAM------ISGLSGRKSSTGSPTSPINAEKLESEDDV---SQ 1825

  Fly   475 AYMDAYSDENYNPKPPGHYTRNRSQRNPASSLCGYGGRMSSMHGQRANSRRSSRNASRNASAI-- 537
            |:::|.::|..:.||  ::::....             :..:.|          :|:|....|  
Mouse  1826 AFLEAVAEEKPHVKP--YFSKTIRD-------------LEVVEG----------SAARFDCKIEG 1865

  Fly   538 YPNSG--GFKTLNVHEEDDDDEGLEAFGH--IDDDDEWSRS--------RREYQQQCE---TLGE 587
            ||:..  .||         ||:.:....|  ||.|::.:.|        ..:.:..|:   :|||
Mouse  1866 YPDPEVVWFK---------DDQSIRESRHFQIDYDEDGNCSLIISDVCGDDDAKYTCKAVNSLGE 1921

  Fly   588 ---------DRFRRQSGSEGDEVEDDED 606
                     :......|.||.|.|::|:
Mouse  1922 ATCTAELIVETMEEGEGEEGGEEEEEEE 1949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 90/290 (31%)
S_TKc 117..403 CDD:214567 90/288 (31%)
MylkNP_647461.3 I-set 42..132 CDD:254352
Ig 42..131 CDD:299845
I-set 165..254 CDD:254352
Ig 183..251 CDD:143165
23ISL 255..409 CDD:293226
I-set 411..501 CDD:254352
Ig 428..498 CDD:143165
I-set 511..597 CDD:254352
IGc2 524..587 CDD:197706
I-set 620..709 CDD:254352
Ig 637..706 CDD:143165
I-set 718..806 CDD:254352
Ig 721..806 CDD:299845
I-set 1129..1218 CDD:254352
IGc2 1142..1208 CDD:197706
Ig 1269..1366 CDD:299845
I-set 1269..1358 CDD:254352
FN3 1362..1453 CDD:238020 3/13 (23%)
STKc_MLCK1 1492..1750 CDD:271093 93/310 (30%)
Pkinase 1495..1750 CDD:278497 93/307 (30%)
I-set 1840..1930 CDD:254352 20/123 (16%)
IGc2 1853..1920 CDD:197706 16/85 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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