DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and dclk2

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:XP_012811056.1 Gene:dclk2 / 100487296 XenbaseID:XB-GENE-960488 Length:727 Species:Xenopus tropicalis


Alignment Length:403 Identity:124/403 - (30%)
Similarity:186/403 - (46%) Gaps:80/403 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PKSGTAASAAAAKASNNNNNNHPRGSGD-SGIRSGSGISCSNTDNSCSQSQSDGQNELTRYSSED 67
            |.:||.:|..:...|..::.:.|...|. .|:|...  .|.:|.|         .|.|.. |.|.
 Frog   330 PVNGTPSSQLSTPKSTKSSCSSPTSPGSFRGLRIPP--HCGSTSN---------VNGLLN-SPEG 382

  Fly    68 VSGNESSEAPNMTEVERQAELNRHKEEMQKKRRKKRISSSLHSSTFQELYKLTGEILGEGAYASV 132
            ::||:.::|                                  |...|.||: |:::|:|.:|.|
 Frog   383 LNGNKFTDA----------------------------------SIILEKYKI-GKVIGDGNFAVV 412

  Fly   133 QTCVNIYTDLEYAVKVIDKIPGHARARVF-REVETFHHCQGHLGILQLIEFFEDDEKFYLVFEKI 196
            :.||...|..|:|:|:|||.....:..:. .||......: |..|:.|||..:...:.|||.|.:
 Frog   413 KECVERSTGKEFALKIIDKAKCCGKEHLIENEVSILRQVK-HPNIIMLIEEMDTTAELYLVMELV 476

  Fly   197 NGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLHKKGIAHRDLKPENIL-CVKTDSLCPIKICD 260
            .||.|...|.....::|.:||.::..:||.:.:||...|.|||:||||:| |...|....:|:.|
 Frog   477 KGGDLFDAITSSTKYTERDASAMVYNLASAMKYLHGLHIVHRDIKPENLLVCEYPDKTKSLKLGD 541

  Fly   261 FDLGSGIKFTTDISSPAATPQLLTPVGSAEFMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILLC 325
            |.|      .|.:..|     |.|..|:..::|||:    :.|.. |..:.|:|:.|||.|||||
 Frog   542 FGL------ATVVDGP-----LYTVCGTPTYVAPEI----IAETG-YGLKVDIWAAGVITYILLC 590

  Fly   326 GYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASN 390
            |:|||           |.||  ..||.||:.|..|...||...|.:::|.||:|||.:|......
 Frog   591 GFPPF-----------RSEN--NLQEDLFDQILIGKLEFPSPYWDNITDSAKELISCMLQVNVEE 642

  Fly   391 RLSAEAVLNHPWI 403
            |.:||.:|:|||:
 Frog   643 RYTAEQILSHPWV 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 103/289 (36%)
S_TKc 117..403 CDD:214567 102/287 (36%)
dclk2XP_012811056.1 DCX1_DCLK2 70..154 CDD:340661
DCX2 193..276 CDD:340589
STKc_DCKL2 396..654 CDD:271086 102/288 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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