DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and camk2g

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:XP_012821441.1 Gene:camk2g / 100135711 XenbaseID:XB-GENE-868520 Length:654 Species:Xenopus tropicalis


Alignment Length:536 Identity:141/536 - (26%)
Similarity:219/536 - (40%) Gaps:126/536 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 FQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVID--KIPGHARARVFREVETFHHCQ--GH 173
            |.:.|:|..| ||:||::.|:.||...::.|||.|:|:  |:......::.||...   |:  .|
 Frog    10 FTDEYQLYEE-LGKGAFSVVRRCVKKSSNQEYAAKIINTKKLSARDHQKLEREARI---CRLLKH 70

  Fly   174 LGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLHKKGIAHR 238
            ..|::|.:...::...||||:.:.||.|...|.....:||.:||..|.:|...::.:|:..|.||
 Frog    71 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHR 135

  Fly   239 DLKPENILCVKTDSLCPIKICDFDLGSGIKFTTDISS---PAATPQLLTPVGSAEFMAPEVVDLF 300
            ||||||:|.........:|:.||  |..|:...|..:   .|.||         .:::|||:   
 Frog   136 DLKPENLLLASKCKGAAVKLADF--GLAIEVQGDQQAWFGFAGTP---------GYLSPEVL--- 186

  Fly   301 VGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGHFSFP 365
              ....|.|..|:|:.|||.||||.|||||         |:..      |..|::.|:.|.:.||
 Frog   187 --RKDPYGKPVDIWACGVILYILLVGYPPF---------WDED------QHKLYQQIKAGAYDFP 234

  Fly   366 EAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPASKHGRRHKALQTPSNIRR 430
            ..||..|:.|||:||:.:|....:.|::|:..|.|||:  |::...||...|     |......|
 Frog   235 SPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWV--CQRSTVASMMHR-----QETVECLR 292

  Fly   431 NHQSAREISQFAESAMAVKRVVLQHFS-MRYDYMKERPNI--------------YQPSQAYMDAY 480
            ...:.|::    :.|:....:|.::|| :.:...|....:              .|.|...:.|.
 Frog   293 KFNARRKL----KGAILTTMLVSRNFSGIAFGCRKAASTVPCTSSTGDTITGVGRQTSAPVVAAT 353

  Fly   481 SDEN---------YNPKPPGHYTRNRSQRNPASSLCGYGGRMSSMHGQRANSRRSSRNASRNASA 536
            |..|         .|.|..|...|..|               ||:|.....:.::|..:....:.
 Frog   354 SAANLVEQAAKSLLNKKTDGVKKRKSS---------------SSVHLMPQTNNKNSIISPAKENP 403

  Fly   537 IYPNSGGFKTLNVHEEDD-------------DDEGLEAFGHIDDD-----DEWSRSRREYQ---- 579
            ....|...:|..||...|             :||.|:|......|     ..||:|..:.|    
 Frog   404 PLQTSMEPQTTVVHNATDGIKGSTESCNTTTEDEDLKANPFCPGDGPLLLQGWSQSESKIQTESL 468

  Fly   580 ------------QQCE 583
                        |.||
 Frog   469 HSQIGLCGSSTAQSCE 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 96/294 (33%)
S_TKc 117..403 CDD:214567 96/292 (33%)
camk2gXP_012821441.1 STKc_CaMKII 12..303 CDD:270988 104/336 (31%)
S_TKc 14..272 CDD:214567 96/292 (33%)
CaMKII_AD 522..649 CDD:285524
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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