DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and camk2a

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:XP_012813848.1 Gene:camk2a / 100101771 XenbaseID:XB-GENE-868353 Length:516 Species:Xenopus tropicalis


Alignment Length:429 Identity:122/429 - (28%)
Similarity:181/429 - (42%) Gaps:81/429 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 SSLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVID--KIPGHARARVFREVETFH 168
            :::..:.|.|.|:|..| ||:||::.|:.||.:.:..|||.|:|:  |:......::.||...  
 Frog     2 ATITCTRFSEEYQLFEE-LGKGAFSIVRRCVKVLSGQEYAAKIINTKKLSARDHQKLEREARI-- 63

  Fly   169 HCQ--GHLGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLH 231
             |:  .|..|::|.:...::...||||:.:.||.|...|.....:||.:||..|::|...:...|
 Frog    64 -CRLLKHPNIVRLHDSISEEGHHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 127

  Fly   232 KKGIAHRDLKPENILCVKTDSLCPIKICDFDLGSGIKFTTDISSPAATPQLLTPVGSAEFMAPEV 296
            :.|:.||||||||:|.........:|:.||.|.        |.............|:..:::|||
 Frog   128 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLA--------IEVEGEQQAWFGFAGTPGYLSPEV 184

  Fly   297 VDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGH 361
            :     ....|.|..|||:.|||.||||.|||||         |:..      |..|::.|:.|.
 Frog   185 L-----RKDPYGKAVDLWACGVILYILLVGYPPF---------WDED------QHRLYQQIKAGA 229

  Fly   362 FSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIR--------MCEQEPP--ASKHG 416
            :.||..||..|:.||||||:.:|....|.|::|...|.||||.        |..||..  ..|..
 Frog   230 YDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFN 294

  Fly   417 RRHK---ALQTPSNIRRNHQSAREIS----------------QFAESAMAVKRVV----LQHFSM 458
            .|.|   |:.|.....||....:..|                |..||:.:....:    .:.||:
 Frog   295 ARRKLKGAILTTMLATRNFSGGKSGSNKKNDGVKKRKSSSSVQLMESSESTNTTIEDEDTKDFSL 359

  Fly   459 RYDYMKERPNIYQPSQAYMDAYSDENYNPKPPGHYTRNR 497
            ........|.:..|            ..||.|....|.:
 Frog   360 AAQNENITPGLENP------------IAPKKPSQTVRKQ 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 97/291 (33%)
S_TKc 117..403 CDD:214567 96/289 (33%)
camk2aXP_012813848.1 STKc_CaMKII 11..302 CDD:270988 105/322 (33%)
CaMKII_AD 384..511 CDD:285524 1/3 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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