Protein Alignment cwo and her4.3

DIOPT Version :10

• Sequence 1: NP_524775.1
• Gene: cwo / 44669
• FlyBaseID: FBgn0259938
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_001154880.1
• Gene: her4.3 / 792198
• ZFINID: ZDB-GENE-081030-7
• Length: 152
• Species: Danio rerio
• Alignment Length: 146
• Identity: 41/146 - (28%)
• Similarity: 75/146 - (51%)
• Gaps: 17/146 - (11%)

  Fly    59 TSRQDPLSHRI----IEKRRRDRMNSCLADLSRLIPPQY-QRKGRGRIEKTEIIEMAIRHLKHLQ 118
            :||:..|::::    :||.||:|:||.:..|..|:..:: :::...|.||.:|:||.:..|:.
Zfish    10 SSRETLLTNKLRKPMVEKIRRERINSSIEKLKTLLAQEFIKQQPDSRQEKADILEMTLDFLRR-- 72

  Fly   119 SECQQKESDYRSGYMDCMKEAAKFLYDVHMQDFCHRLLGRLQEHI----DEMFKTDCYKSTRSCH 179
               .||.|....|...|::||..||....:|...|..|.:|..|:    |:..:.|..::|.: |
Zfish    73 ---SQKSSAAGDGRSRCVQEAVSFLSQCPVQTQSHTRLMKLFLHMQTPADQHTRVDNPQTTET-H 133

  Fly   180 MPDNVSASSGSPHQAY 195
            .  |.||...:|.:::
Zfish   134 A--NSSAKQHTPVRSH 147

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cwo	NP_524775.1	bHLH-O_Cwo_like	62..121	CDD:381446	17/63 (27%)
		ORANGE	126..168	CDD:128787	13/45 (29%)
her4.3	NP_001154880.1	bHLH-O_HES5	19..77	CDD:381467	18/62 (29%)
		ORANGE	77..123	CDD:128787	13/45 (29%)