Protein Alignment cwo and her8.2

DIOPT Version :10

• Sequence 1: NP_524775.1
• Gene: cwo / 44669
• FlyBaseID: FBgn0259938
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_001159638.1
• Gene: her8.2 / 565269
• ZFINID: ZDB-GENE-060815-4
• Length: 211
• Species: Danio rerio
• Alignment Length: 224
• Identity: 57/224 - (25%)
• Similarity: 97/224 - (43%)
• Gaps: 49/224 - (21%)

  Fly    40 SATAYSEDDAEYATGRRNKTSRQDPLSHRIIEKRRRDRMNSCLADLSRLIPPQYQRKGRGRIEKT 104
            :||...::..:.....:.:...:.||    ||::||:|:|.||..|...:...: :..:.::||.
Zfish     4 TATKLQQNSCQLHISSKEERKLRKPL----IERKRRERINLCLDQLRETVVAVF-KPDQSKLEKA 63

  Fly   105 EIIEMAIRHLKHLQSECQQKESD----------YRSGYMDCMKEAAKFLYDVHMQDFCHRLLG-R 158
            :|:||.::||:::||   .:.||          |.:||:.||:|....|   |..|:..:.|| |
Zfish    64 DILEMTVKHLQNIQS---SRVSDPVLNTGARQRYSTGYIQCMQEVHNLL---HSCDWMDKTLGSR 122

  Fly   159 LQEHIDEMFKTDCYKSTRSC-HMPDNVSASSGSPHQAY---------HPPLCHLRDMLATSASDV 213
            |..|   :||: ...|.:.| .:|.....|..|.|..|         .|..|.....|....:
Zfish   123 LLNH---LFKS-LPLSAKDCPRLPKTSLTSVPSDHSEYSSFHVDETASPKPCSSSPFLCKRPN-- 181

  Fly   214 EHSQDH-------NDVKDLSFRNHLNQLQ 235
            :....|       :||:.    :||:.||
Zfish   182 QSQNQHFTPIRMPHDVES----SHLSVLQ 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cwo	NP_524775.1	bHLH-O_Cwo_like	62..121	CDD:381446	20/58 (34%)
		ORANGE	126..168	CDD:128787	16/52 (31%)
her8.2	NP_001159638.1	bHLH_O_HES	30..80	CDD:381416	18/53 (34%)
		Hairy_orange	93..132	CDD:462193	16/45 (36%)