DRSC/TRiP Functional Genomics Resources

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Protein Alignment cwo and hes2.1

DIOPT Version :10

Sequence 1:NP_524775.1 Gene:cwo / 44669 FlyBaseID:FBgn0259938 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001116717.2 Gene:hes2.1 / 559147 ZFINID:ZDB-GENE-081104-104 Length:195 Species:Danio rerio


Alignment Length:139 Identity:38/139 - (27%)
Similarity:64/139 - (46%) Gaps:13/139 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 IIEKRRRDRMNSCLADLSRLIPPQYQRKGR--GRIEKTEIIEMAIRHLKHLQSECQQKESD-YRS 130
            ::|||||.|:|..|..|..||.|...:...  .::||.:|:||.:|.|:.|.|...:.::| |:.
Zfish    36 LMEKRRRARINDSLNHLKTLILPLVGKDASRYSKLEKADILEMTVRFLRDLPSSSAKGQTDSYKE 100

  Fly   131 GYMDCMKEAAKFLYDVHMQDFCHRLLGRLQEHIDEMFKTDCYKSTRSCHMPDNVSASSGSPHQAY 195
            ||..|::..:..|...:::...|       :.:.|..:.....|:.||   .|..|.:.......
Zfish   101 GYKACLQRISTMLPQSNLETEAH-------QRVSEFIQQSMASSSSSC---QNCCAQNSKMISQM 155

  Fly   196 HPPLCHLRD 204
            |..|..||:
Zfish   156 HQRLVSLRN 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cwoNP_524775.1 bHLH-O_Cwo_like 62..121 CDD:381446 21/53 (40%)
ORANGE 126..168 CDD:128787 8/42 (19%)
hes2.1NP_001116717.2 None

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