DRSC/TRiP Functional Genomics Resources

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Protein Alignment cwo and hes2.1

DIOPT Version :9

Sequence 1:NP_524775.1 Gene:cwo / 44669 FlyBaseID:FBgn0259938 Length:698 Species:Drosophila melanogaster
Sequence 2:XP_021333940.1 Gene:hes2.1 / 559147 ZFINID:ZDB-GENE-081104-104 Length:195 Species:Danio rerio


Alignment Length:139 Identity:38/139 - (27%)
Similarity:64/139 - (46%) Gaps:13/139 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 IIEKRRRDRMNSCLADLSRLIPPQYQRKGR--GRIEKTEIIEMAIRHLKHLQSECQQKESD-YRS 130
            ::|||||.|:|..|..|..||.|...:...  .::||.:|:||.:|.|:.|.|...:.::| |:.
Zfish    36 LMEKRRRARINDSLNHLKTLILPLVGKDASRYSKLEKADILEMTVRFLRDL
PSSSAKGQTDSYKE 100

  Fly   131 GYMDCMKEAAKFLYDVHMQDFCHRLLGRLQEHIDEMFKTDCYKSTRSCHMPDNVSASSGSPHQAY 195
            ||..|::..:..|...:::...|       :.:.|..:.....|:.||   .|..|.:.......
Zfish   101 GYKACLQRISTMLPQSNLETEAH-------QRVSEFIQQSMASSSSSC---QNCCAQNSKMISQM 155

  Fly   196 HPPLCHLRD 204
            |..|..||:
Zfish   156 HQRLVSLRN 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cwoNP_524775.1 HLH 66..118 CDD:306515 19/50 (38%)
ORANGE 126..168 CDD:128787 8/42 (19%)
hes2.1XP_021333940.1 HLH 30..86 CDD:306515 19/49 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573847
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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