Protein Alignment cwo and Helt

DIOPT Version :9

• Sequence 1: NP_524775.1
• Gene: cwo / 44669
• FlyBaseID: FBgn0259938
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: XP_008769494.1
• Gene: Helt / 498633
• RGDID: 1564073
• Length: 241
• Species: Rattus norvegicus
• Alignment Length: 351
• Identity: 83/351 - (23%)
• Similarity: 121/351 - (34%)
• Gaps: 127/351 - (36%)

  Fly    56 RNKTSRQDPLSHRIIEKRRRDRMNSCLADLSRLIPPQYQRKGRGRIEKTEIIEMAIRHLKHLQSE 120
            |.|..::.|:||::||||||||:|.||.:|.:.:|....::..|::||.||:||.:::|:.|.|
  Rat     4 RLKERKRTPVSHKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQYLRALHS- 67

  Fly   121 CQQKESDYRSGYMDCMKEAAKFLYDVHMQDFCHRLLGRLQEHIDEMFKTDCYKSTRSCHMPDNVS 185
                 :|:..|     :|.|:.|     .:|.:..
  Rat    68 -----ADFPRG-----REKAELL-----AEFANYF------------------------------ 87

  Fly   186 ASSGSPHQAYHPPLCHLRDMLATSASDVEHSQDHNDVKDLSFRNHLNQLQRSQQAAAAAAVAAAA 250
                  |..||..:.:|...|.|    ||..    :.||..:...|..||...:..|..|.
  Rat    88 ------HYGYHECMKNLVHYLTT----VERM----ETKDTKYARILAFLQSKARLGAEPAF---- 134

  Fly   251 VAVANGSSPASNAGVDSKVPLTNGGGTGGAPPAADNVPSNSTGSGSA---AACAGGNSNSSGSNS 312
                   .|.|....|....|         .||....|.:|.|..:.   .|..|
  Rat   135 -------PPLSLPEPDFSYQL---------HPAGPEFPGHSPGEATVFPQGATPG---------- 173

  Fly   313 SNAASSTICPPAGGSCPA------KVTPLAAHQQPHQAPVITSTAPHH--HHHHTDSSHHDFESS 369
                 |...||.....||      ...||....||| :|.:   ||..  ..|:.:...|.
  Rat   174 -----SFPWPPGAARSPALPYLSSATVPLPTPAQPH-SPFL---APMQGLDRHYLNLIGHG---- 225

  Fly   370 REPILHTDTSNMHSPPPRDLLLQQHP 395
                 |.:|.|:|:|        |||
  Rat   226 -----HPNTLNLHTP--------QHP 238

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cwo	NP_524775.1	HLH	66..118	CDD:306515	23/51 (45%)
		ORANGE	126..168	CDD:128787	6/41 (15%)
Helt	XP_008769494.1	bHLH-O_HELT	14..69	CDD:381414	25/60 (42%)
		Hairy_orange	87..127	CDD:400076	13/83 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166334627
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1054305at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10985
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.950