DRSC/TRiP Functional Genomics Resources

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Protein Alignment cwo and E(spl)m5-HLH

DIOPT Version :10

Sequence 1:NP_524775.1 Gene:cwo / 44669 FlyBaseID:FBgn0259938 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster


Alignment Length:174 Identity:42/174 - (24%)
Similarity:71/174 - (40%) Gaps:37/174 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 NKTSRQDPLSHRIIEKRRRDRMNSCLADLSRLIPPQYQRKGRGRIEKTEIIEMAIRHLKHLQSEC 121
            :||.....:...::|::||.|||.||..|..|:..........|::|.|::|.|:..::....:.
  Fly    13 SKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRMDKAEMLEAALVFMRKQVVKQ 77

  Fly   122 QQKES-----DYRSGYMDCMKEAAKFL-------YDVHMQDFCHRLLGRLQEHIDEMFKTDCYKS 174
            |...|     .:::|||:.:.|.::.:       .||......|     |......|.:.|..::
  Fly    78 QAPVSPLPMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTH-----LGVEFQRMLQADQVQT 137

  Fly   175 TRSCHMPDNVS-ASSGSPHQAYHPPLCHLRDMLATSASDVEHSQ 217
            :.:...|..:| ||||     ||              ||.|.||
  Fly   138 SVTTSTPRPLSPASSG-----YH--------------SDNEDSQ 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cwoNP_524775.1 bHLH-O_Cwo_like 62..121 CDD:381446 15/58 (26%)
ORANGE 126..168 CDD:128787 10/53 (19%)
E(spl)m5-HLHNP_524511.1 bHLH-O_ESM5_like 20..78 CDD:381486 15/57 (26%)
ORANGE 87..131 CDD:128787 9/48 (19%)

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