Protein Alignment cwo and E(spl)m3-HLH

DIOPT Version :10

• Sequence 1: NP_524775.1
• Gene: cwo / 44669
• FlyBaseID: FBgn0259938
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_524509.2
• Gene: E(spl)m3-HLH / 43156
• FlyBaseID: FBgn0002609
• Length: 224
• Species: Drosophila melanogaster
• Alignment Length: 244
• Identity: 53/244 - (21%)
• Similarity: 91/244 - (37%)
• Gaps: 69/244 - (28%)

  Fly    57 NKTSRQDPLSHRIIEKRRRDRMNSCLADLSRLIPPQYQRKGR--GRIEKTEIIEMAIRHLKHLQ- 118
            :||.:...:...::|::||.|:|.||.||..|:....|::|.  .|:||.:|:|:.:.|::.|:
  Fly     6 SKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDHMRKLKQ 70

  Fly   119 ------------------SECQQKESDYRSGYMDCMKEAAKFLYDVHMQDFCHRLLGRLQEHIDE 165
                              |........:||||:....:..:.|......|    .:||
  Fly    71 RGGLSLQGVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTD----EIGR------- 124

  Fly   166 MFKTDCYKSTRSCHMPDNVSASSGSPHQAYHPPLCHLR-DMLATSASDVEHSQDHNDVKDLSFRN 229
              |...:.|||                      |..|: .:|.......:|.|  ..:...|.|.
  Fly   125 --KIMKFLSTR----------------------LIELQTQLLQQQQQQQQHQQ--QQIPQSSGRL 163

  Fly   230 HLNQLQRSQQAAAAAAVAAAA----------VAVANGSSPASNAGVDSK 268
            ....|.....||||||::.::          |...:|::.:..|.|.|:
  Fly   164 AFPLLGGYGPAAAAAAISYSSFLTSKDELIDVTSVDGNALSETASVSSQ 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cwo	NP_524775.1	bHLH-O_Cwo_like	62..121	CDD:381446	20/79 (25%)
		ORANGE	126..168	CDD:128787	8/41 (20%)
E(spl)m3-HLH	NP_524509.2	bHLH-O_ESMB_like	5..71	CDD:381584	21/64 (33%)
		ORANGE	96..136	CDD:128787	13/74 (18%)