DRSC/TRiP Functional Genomics Resources

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Protein Alignment cwo and E(spl)mgamma-HLH

DIOPT Version :9

Sequence 1:NP_524775.1 Gene:cwo / 44669 FlyBaseID:FBgn0259938 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_524504.2 Gene:E(spl)mgamma-HLH / 43151 FlyBaseID:FBgn0002735 Length:205 Species:Drosophila melanogaster


Alignment Length:207 Identity:43/207 - (20%)
Similarity:91/207 - (43%) Gaps:48/207 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 NKTSRQDPLSHRIIEKRRRDRMNSCLADLSRLIPPQYQRKGR--GRIEKTEIIEMAIRHLKHLQS 119
            :||.:...:...::|::||.|:|.||.:|..|:....:.:|.  .|:||.:|:|:.:.||:.::.
  Fly    10 SKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILELTVTHLQKMKQ 74

  Fly   120 ECQQKESD----------YRSGYMDCMKEAAKFLYDV---------HMQDFCHRLLGRLQEHIDE 165
            :.|.|.:.          :||||:..:.|.::.|..:         .:.....:.|.::|....|
  Fly    75 QRQHKRASGDESLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSLGTQLMTHLGQRLNQIQPAEKE 139

  Fly   166 MFKTDCYKSTRSCHMPDN---------VSASSGSPHQAYHPPLCHLRDMLATSAS-----DVEHS 216
            :...   .:..|.|:.:.         :|:.:|||:.          :..:||.|     ||...
  Fly   140 VLPV---TAPLSVHIANRDAYSVPISPISSYAGSPNS----------NTSSTSHSLLTTIDVTKM 191

  Fly   217 QDHNDVKDLSFR 228
            :|.::.::..:|
  Fly   192 EDDSEDEENVWR 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cwoNP_524775.1 HLH 66..118 CDD:306515 17/53 (32%)
ORANGE 126..168 CDD:128787 9/60 (15%)
E(spl)mgamma-HLHNP_524504.2 HLH 15..77 CDD:238036 17/61 (28%)
ORANGE 91..135 CDD:128787 7/43 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438367
Domainoid 1 1.000 45 1.000 Domainoid score I4621
eggNOG 1 0.900 - - E1_KOG4304
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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