DRSC/TRiP Functional Genomics Resources

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Protein Alignment cwo and hes6

DIOPT Version :10

Sequence 1:NP_524775.1 Gene:cwo / 44669 FlyBaseID:FBgn0259938 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_919381.3 Gene:hes6 / 373116 ZFINID:ZDB-GENE-030828-5 Length:225 Species:Danio rerio


Alignment Length:302 Identity:66/302 - (21%)
Similarity:104/302 - (34%) Gaps:100/302 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 ATAYSEDDAEYATGRRNKTSRQDPLSHRIIEKRRRDRMNSCLADLSRLI-PPQYQRKGRGRIEKT 104
            |:..:..|.:|...:..||.:  ||    :||:||.|:|..|.:|..|: .|..|.|    :|..
Zfish     4 ASRSNTHDEDYYGIKDRKTRK--PL----VEKKRRARINESLQELRLLLADPDAQVK----MENA 58

  Fly   105 EIIEMAIRHLKH-LQSECQQKES-------DYRSGYMDCMKEAAKFLYDVHMQDFCHRLLGRLQE 161
            |::||.::.::. ||::.::.:|       .:.:||:.||.|...|:      ..|        .
Zfish    59 EVLEMTVKRVESILQNKAKEADSVNREANERFAAGYIQCMHEVHTFV------SSC--------P 109

  Fly   162 HIDEMFKTDCYKSTRSCHMPDNVSASSGSPHQAYHPPLCHLRDMLATSASDVEHSQDHNDVKDLS 226
            .||.....|.......| ||.|...              ..:|:|:...||........:     
Zfish   110 GIDATIAADLLNHLLEC-MPLNDEE--------------RFQDILSDLISDYNSGTWPGE----- 154

  Fly   227 FRNHLNQLQRSQQAAAAAAVAAAAVAVANGSSPASNAGVDSKVPLTNGGGTGGAPPAADNVPSNS 291
                          ||.|.::....:||||.|.|.:                         |:.|
Zfish   155 --------------AAYATLSPGGTSVANGGSSALS-------------------------PAPS 180

  Fly   292 TGSGSAAACAGGNSNSSGSNSSNAASSTICPPAGGSCPAKVT 333
            |.| |...|       |..:.::...|.|...||...|...|
Zfish   181 TTS-SDDIC-------SDLDDTDTEHSRISVDAGDQAPVVPT 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cwoNP_524775.1 bHLH-O_Cwo_like 62..121 CDD:381446 20/60 (33%)
ORANGE 126..168 CDD:128787 10/48 (21%)
hes6NP_919381.3 None

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