Protein Alignment cwo and her1

DIOPT Version :9

• Sequence 1: NP_524775.1
• Gene: cwo / 44669
• FlyBaseID: FBgn0259938
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_571153.1
• Gene: her1 / 30287
• ZFINID: ZDB-GENE-980526-125
• Length: 328
• Species: Danio rerio
• Alignment Length: 337
• Identity: 65/337 - (19%)
• Similarity: 113/337 - (33%)
• Gaps: 128/337 - (37%)

  Fly    69 IIEKRRRDRMNSCLADL----------SRLIPPQYQRKGRGRIEKTEIIEMAIRHLK-------- 115
            :|||:||||:|..|.:|          |||..|        ::||.||:|:|:.:::
Zfish    19 VIEKKRRDRINQRLEELRTLLLDNTLDSRLQNP--------KLEKAEILELAVEYIRTKTATARD 75

  Fly   116 ------------------------------HLQSECQQKESDYRSGYMDCMKEAAKFL------- 143
                                          .:|:........|::|:.:|:..:|.|:
Zfish    76 QGDSSKDTHDPKPPPLLSRRPQMPCASIPESIQTHNSPSNPIYKAGFKECISRSASFIDCVEPSQ 140

  Fly   144 YDVHMQDFCHRLLGRLQEHIDEMFKTDCYKSTRSCHMPDNVSASSGSPH------QAYHPPLCHL 202
            .|..:|..||        |:|                    |.||..||      ..:||.:.:.
Zfish   141 RDSFVQGLCH--------HLD--------------------SYSSALPHGRVSSNPTHHPWIPNP 177

  Fly   203 RDMLATSASDVEHSQDH-------NDVKDLSFRNHLNQLQRSQQAAAAAAVAAAAVAVANGSSPA 260
            .....|....:.|.:.:       |.:...||. ||:...:....:...::           ||.
Zfish   178 ELSCRTDVQSIGHMRANPEPYSYANSLYPKSFM-HLHPTGQHPYLSPPYSI-----------SPP 230

  Fly   261 SNAGVDSKVPLTNGGGTGGAPPAADNVPSNSTGSGSAAACAGGNSNSSGSNSSNAASSTICPPAG 325
            .:.|..|..|..:...|..:.|.....|.:.:...:       :|:||.:.|:.:.|:|..|...
Zfish   231 PSPGFSSSSPPFSSSPTYLSVPCQFPFPPSISPHST-------DSSSSSTLSTVSLSTTSLPVVP 288

  Fly   326 G-----SCPAKV 332
            |     |.|.:|
Zfish   289 GPHLQVSSPTRV 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cwo	NP_524775.1	HLH	66..118	CDD:306515	20/96 (21%)
		ORANGE	126..168	CDD:128787	11/48 (23%)
her1	NP_571153.1	HLH	10..67	CDD:238036	20/55 (36%)
		Hairy_orange	118..157	CDD:284859	12/66 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170573850
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4304
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.740