DRSC/TRiP Functional Genomics Resources

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Protein Alignment cwo and Hes2

DIOPT Version :9

Sequence 1:NP_524775.1 Gene:cwo / 44669 FlyBaseID:FBgn0259938 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001288734.1 Gene:Hes2 / 15206 MGIID:1098624 Length:157 Species:Mus musculus


Alignment Length:164 Identity:46/164 - (28%)
Similarity:68/164 - (41%) Gaps:34/164 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 EDDAEYATGRRNKTSRQDPLSHRIIEKRRRDRMNSCLADLSRLIPPQY--QRKGRGRIEKTEIIE 108
            ||.||.   |:|    ..||    :|||||.|:|..|:.|..|:.|..  :.....::||.:|:|
Mouse     8 EDAAEL---RKN----LKPL----LEKRRRARINESLSQLKGLVLPLLGAETSRSSKLEKADILE 61

  Fly   109 MAIRHLKH-----LQSECQQKESDYRSGYMDCMKEAAKFLYDVHMQDFCHRL----LGRLQEHID 164
            |.:|.|:.     ..|......:.|..||..|:...|:.|      ..|..|    ..||.||:.
Mouse    62 MTVRFLQEQPATLYSSAAPGPLNSYLEGYRACLARLARVL------PACSVLEPAVSARLLEHLR 120

  Fly   165 EMFKTDCYKSTRSCHMPDNVSASSGSPHQAYHPP 198
            :...:|   .:.|..:|   .|.:.:|.....||
Mouse   121 QRTVSD---DSPSLTLP---PAPAPAPSPPVPPP 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cwoNP_524775.1 HLH 66..118 CDD:306515 18/58 (31%)
ORANGE 126..168 CDD:128787 12/45 (27%)
Hes2NP_001288734.1 bHLH_SF 10..73 CDD:381792 24/73 (33%)
ORANGE 85..123 CDD:128787 12/43 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..157 7/31 (23%)
WRPW motif 154..157
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830932
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4304
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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