DRSC/TRiP Functional Genomics Resources

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Protein Alignment cwo and hry

DIOPT Version :10

Sequence 1:NP_524775.1 Gene:cwo / 44669 FlyBaseID:FBgn0259938 Length:698 Species:Drosophila melanogaster
Sequence 2:XP_316733.4 Gene:hry / 1277284 VectorBaseID:AGAMI1_005577 Length:374 Species:Anopheles gambiae


Alignment Length:423 Identity:98/423 - (23%)
Similarity:165/423 - (39%) Gaps:129/423 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 RRNKTSRQDPLSHRIIEKRRRDRMNSCLADLSRLI-------PPQYQRKGRGRIEKTEIIEMAIR 112
            :|:..:|:.  :..|:|||||.|:|:||.:|..||       |.::     .::||.:|:||.::
Mosquito    28 KRSSDNRRS--NKPIMEKRRRARINNCLNELKTLILDAMKKDPARH-----SKLEKADILEMTVK 85

  Fly   113 HLKHLQSE--CQQKESD------YRSGYMDCMKEAAKF-LYDVHMQDFCHRLLGRLQEHIDEMFK 168
            ||::||.:  ...:.:|      :::|:.:|.:|..:| ..:.|::   .|||..|...|:.:.|
Mosquito    86 HLENLQRQQTAMSQATDPSVMNKFKAGFNECAQEVGRFPELEPHVK---RRLLQHLNNCINGVNK 147

  Fly   169 TDCYKSTRSCHMPDNVSASSGSPHQAYH----PPLCHLRDMLATSASDVEHSQDHNDVKDLSFRN 229
            :|..|  |..|.         ..||..|    ||           :|..:|...|    ......
Mosquito   148 SDLPK--RHHHQ---------QQHQQQHILPSPP-----------SSPEQHGHPH----PYGLAG 186

  Fly   230 HLNQLQRSQQAAAAAAVAAAAVAVANGSSPASNAGVDSKVPLTNGGGTGGAP------------- 281
            |...|...|.......:|.:.|.:.....|  |..:...:|.       |||             
Mosquito   187 HPGPLSAVQAGNGGVYMAGSNVQLIPTKLP--NGSIAFMLPT-------GAPHQTLTTQVHPSQP 242

  Fly   282 --PAADNVPSNSTGSGSAAACAGGNSNSSGSNS-------SNAASSTI-CPPAGGSCPAKVTPLA 336
              |....:||.:..:|||      :|..||::|       .:|.||.. .||         :|..
Mosquito   243 PVPMLVPIPSRTASTGSA------SSGHSGTSSLYDRVPREHATSSPYHAPP---------SPAN 292

  Fly   337 AHQQP---HQA--PVITSTAPHHHHHHTDSSHHDFESSREPILHTDTSNMHSPPPRDLLLQQHPH 396
            :|.:|   |.|  ....|:..:.|.|...||    .||...:..:.:|:..||.....|:.:.| 
Mosquito   293 SHYEPMECHSAVNSSSNSSTGYLHQHQQSSS----ASSSSSMSSSSSSSFSSPDSPLSLVMKKP- 352

  Fly   397 LAHSHHTQDSLMSVRMRNYSESSHEIEHNNNYK 429
                :|.:|            ..||::|:::.|
Mosquito   353 ----YHDED------------EDHEMKHDDDGK 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cwoNP_524775.1 bHLH-O_Cwo_like 62..121 CDD:381446 23/67 (34%)
ORANGE 126..168 CDD:128787 11/48 (23%)
hryXP_316733.4 None

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