Protein Alignment cwo and Bhlhe41

DIOPT Version :9

• Sequence 1: NP_524775.1
• Gene: cwo / 44669
• FlyBaseID: FBgn0259938
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: XP_038964817.1
• Gene: Bhlhe41 / 117095
• RGDID: 70900
• Length: 410
• Species: Rattus norvegicus
• Alignment Length: 386
• Identity: 91/386 - (23%)
• Similarity: 142/386 - (36%)
• Gaps: 91/386 - (23%)

  Fly    55 RRNKTSRQDPLSHRIIEKRRRDRMNSCLADLSRLIPPQYQRKGRGRIEKTEIIEMAIRHLKHLQS 119
            :|:.|.....|.||:|||:||||:|.|:|.|..|:|...:....|.:||..::|:.::|||.|.:
  Rat    37 KRDDTKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTA 101

  Fly   120 ECQQK------------------ESD---YRSGYMDCMKEAAKFLYDVH----MQDFCHRLLGRL 159
            ..:|:                  ::|   :.||:..|.||..::|....    .:..|.:|:..|
  Rat   102 LTEQQHQKIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQYLARFESWTPREPRCAQLVSHL 166

  Fly   160 QEHIDEMFKTDCYKSTRSCHMP--DNVSASSGSPHQAYHPPLCHLRDMLATSASDVEHSQDHNDV 222
            .....::..............|  ...:|:|||...|...|:.    ......::.||..|
  Rat   167 HAVATQLLTPQVTPGRGPGRAPCSAGAAAASGSERVARCVPVI----QRTQPGTEPEHDTD---- 223

  Fly   223 KDLSFRNHLNQ----------------LQRSQQAAAAA------AVAAAAVAVANGS-------- 257
            .|..:.....|                .:|.:..|..|      |:..:.||:..|:
  Rat   224 TDSGYGGEAEQGRAAVKQEPPGDPSPAPKRLKLEARGALLGPEPALLGSLVALGGGAPFAQPAAA 288

  Fly   258 ---------SPASNAGVDSKVPLTNGGGTGG--APPAADNVPSNSTGSGSAAACAGGNSNSSGSN 311
                     ||::.|.|.   |..:..|...  .|.||...|....|..:|||.|       .:.
  Rat   289 PFCLPFYLLSPSAAAYVQ---PWLDKSGLDKYLYPAAAAPFPLLYPGIPAAAAAA-------AAA 343

  Fly   312 SSNAASSTICPPAGGSCPAKVTPLAAHQQPHQAPVITSTAPHHHHHHTDSSHH-DFESSRE 371
            :....||.:.||...:..|...|..||:   .||. .|..|.|.|..|...|. :.|||:|
  Rat   344 AFPCLSSVLSPPPEKAGSAAGAPFLAHE---VAPP-GSLRPQHAHSRTHLPHAVNPESSQE 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cwo	NP_524775.1	HLH	66..118	CDD:306515	22/51 (43%)
		ORANGE	126..168	CDD:128787	10/48 (21%)
Bhlhe41	XP_038964817.1	bHLH-O_DEC2	31..122	CDD:381593	27/84 (32%)
		ORANGE	129..175	CDD:128787	9/45 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166334630
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.840