Protein Alignment SmD1 and SMD1

DIOPT Version :10

• Sequence 1: NP_524774.1
• Gene: SmD1 / 44668
• FlyBaseID: FBgn0261933
• Length: 124
• Species: Drosophila melanogaster
• Sequence 2: NP_011588.3
• Gene: SMD1 / 852964
• SGDID: S000003306
• Length: 146
• Species: Saccharomyces cerevisiae
• Alignment Length: 148
• Identity: 56/148 - (37%)
• Similarity: 72/148 - (48%)
• Gaps: 35/148 - (23%)

  Fly     1 MKLVRFLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIK----------------- 48
            ||||.||.||.:|.|||||||||.:.||:..|...||..|..|::|:.
Yeast     1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASL 65

  Fly    49 ----NRDP------VHLETLSIRGNNIRYFILPDSLPLETLLIDDTPKSKTKKKDSGRVGN---- 99
                .:.|      ..|:.::||||.||..||||||.|::||:|.  |.....:.||::.|
Yeast    66 YLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVDQ--KQLNSLRRSGQIANDPSK 128

  Fly   100 -RGRGRGARGRGGPRGRG 116
             |.|..||.....|| ||
Yeast   129 KRRRDFGAPANKRPR-RG 145

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD1	NP_524774.1	Sm_D1	2..93	CDD:212471	44/117 (38%)
SMD1	NP_011588.3	Sm_like	2..111	CDD:469694	43/110 (39%)