Protein Alignment SmD1 and LSM10

DIOPT Version :9

• Sequence 1: NP_524774.1
• Gene: SmD1 / 44668
• FlyBaseID: FBgn0261933
• Length: 124
• Species: Drosophila melanogaster
• Sequence 2: NP_116270.1
• Gene: LSM10 / 84967
• HGNCID: 17562
• Length: 123
• Species: Homo sapiens
• Alignment Length: 108
• Identity: 29/108 - (26%)
• Similarity: 50/108 - (46%)
• Gaps: 11/108 - (10%)

  Fly     3 LVRFLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPVHLETLSIRGNNIRY 67
            |:..|..|.....|::|::.:..||.|..||..||..|..|..|.:....|.|:.|.:.|.|:||
Human    17 LIILLQGLQGRVTTVDLRDESVAHGRIDNVDAFMNIRLAKVTYTDRWGHQVKLDDLFVTGRNVRY 81

  Fly    68 FILPDSLPLETLLIDDTPKSKTKKKDSGRVGNRGRGRGARGRG 110
            ..:||.:.:.:.:           :...::.:|.|..|.:|:|
Human    82 VHIPDDVNITSTI-----------EQQLQIIHRVRNFGGKGQG 113

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD1	NP_524774.1	Sm_D1	2..93	CDD:212471	24/89 (27%)
LSM10	NP_116270.1	LSm10	8..85	CDD:212480	22/67 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	2	1.810