Protein Alignment SmD1 and AT4G02840

DIOPT Version :9

• Sequence 1: NP_524774.1
• Gene: SmD1 / 44668
• FlyBaseID: FBgn0261933
• Length: 124
• Species: Drosophila melanogaster
• Sequence 2: NP_001190664.1
• Gene: AT4G02840 / 828163
• AraportID: AT4G02840
• Length: 126
• Species: Arabidopsis thaliana
• Alignment Length: 128
• Identity: 83/128 - (64%)
• Similarity: 103/128 - (80%)
• Gaps: 14/128 - (10%)

  Fly     1 MKLVRFLMKLSHETVTIELKNGTQIHGTIT----------GVDVAMNTHLKSVRMTIKNRDPVHL 55
            ||||||||||::|||:|||||||.:|||||          ||||:||||||:|::|:|.::||.|
plant     1 MKLVRFLMKLNNETVSIELKNGTIVHGTITDEYTRFYLNRGVDVSMNTHLKAVKLTLKGKNPVTL 65

  Fly    56 ETLSIRGNNIRYFILPDSLPLETLLIDDTPKSKTKKKDSGRVGNRGRGRGARGRGGPRGRGRG 118
            :.||:|||||||:||||||.|||||::|||:.|.||..:|:: ..||||| ||||  ||||||
plant    66 DHLSVRGNNIRYYILPDSLNLETLLVEDTPRIKPKKPTAGKI-PAGRGRG-RGRG--RGRGRG 124

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD1	NP_524774.1	Sm_D1	2..93	CDD:212471	66/100 (66%)
AT4G02840	NP_001190664.1	Sm_D1	2..103	CDD:212471	66/100 (66%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	104	1.000	Domainoid score	I2231
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H107532
Inparanoid	1	1.050	165	1.000	Inparanoid score	I1588
OMA	1	1.010	-	-		QHG54535
OrthoDB	1	1.010	-	-		D1579192at2759
OrthoFinder	1	1.000	-	-		FOG0004375
OrthoInspector	1	1.000	-	-		otm2671
orthoMCL	1	0.900	-	-		OOG6_102452
Panther	1	1.100	-	-	O	PTHR23338
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3100
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	15	14.840