Protein Alignment SmD1 and snrpd3

DIOPT Version :9

• Sequence 1: NP_524774.1
• Gene: SmD1 / 44668
• FlyBaseID: FBgn0261933
• Length: 124
• Species: Drosophila melanogaster
• Sequence 2: NP_001017093.1
• Gene: snrpd3 / 549847
• XenbaseID: XB-GENE-1014502
• Length: 126
• Species: Xenopus tropicalis
• Alignment Length: 128
• Identity: 40/128 - (31%)
• Similarity: 60/128 - (46%)
• Gaps: 20/128 - (15%)

  Fly     8 MKLSHET----VTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPVHLETLSIRGNNIRYF 68
            :|:.||.    ||.|...|....|.:...:..||..:.::.:|.::.....||.:.|||:.||:.
 Frog     7 IKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYIRGSKIRFL 71

  Fly    69 ILPDSLPLETLLIDDTPKSKT-KKKDSGRVGNRGRGR------GARGRGGPRGRGRGRASGRR 124
            ||||       ::.:.|..|: |.|:.|....||:..      .|||||  ||.|||....:|
 Frog    72 ILPD-------MLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVAARGRG--RGMGRGNIFQKR 125

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD1	NP_524774.1	Sm_D1	2..93	CDD:212471	25/89 (28%)
snrpd3	NP_001017093.1	Sm_D3	6..75	CDD:212468	20/67 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910