Protein Alignment SmD1 and Lsm6

DIOPT Version :9

• Sequence 1: NP_524774.1
• Gene: SmD1 / 44668
• FlyBaseID: FBgn0261933
• Length: 124
• Species: Drosophila melanogaster
• Sequence 2: XP_038953847.1
• Gene: Lsm6 / 498934
• RGDID: 1561937
• Length: 98
• Species: Rattus norvegicus
• Alignment Length: 89
• Identity: 26/89 - (29%)
• Similarity: 37/89 - (41%)
• Gaps: 18/89 - (20%)

  Fly     6 FLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKS----VRMTIKNRDPVHLETLSIRGNN-I 65
            ||.::....|.::|.:|....|.:..:|..||..|:.    |...:||:    .....||||| :
  Rat    11 FLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNK----YGDAFIRGNNGL 71

  Fly    66 RYF---------ILPDSLPLETLL 80
            .|.         ||...|.||.||
  Rat    72 EYTPDQFVSGKRILRGILELEILL 95

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD1	NP_524774.1	Sm_D1	2..93	CDD:212471	26/89 (29%)
Lsm6	XP_038953847.1	LSm6	7..69	CDD:212473	16/61 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810