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Protein Alignment SmD1 and CG10418
DIOPT Version :10
| Sequence 1: | NP_524774.1 |
Gene: | SmD1 / 44668 |
FlyBaseID: | FBgn0261933 |
Length: | 124 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_648570.1 |
Gene: | CG10418 / 39408 |
FlyBaseID: | FBgn0036277 |
Length: | 95 |
Species: | Drosophila melanogaster |
| Alignment Length: | 90 |
Identity: | 27/90 - (30%) |
| Similarity: | 45/90 - (50%) |
Gaps: | 3/90 - (3%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MKLVRFLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDP--VHLETLSIRGN 63
|....|...|..:.|.:||||...|.||:..||..:|..|..:.:|..::.| :.::...|||:
Fly 1 MLFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 65
Fly 64 NIRYFILPDSLPLETLLIDDTPKSK 88
.:||..||.. .::|.|:.|..:.:
Fly 66 VVRYVQLPGD-EVDTQLLQDAARKE 89
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmD1 | NP_524774.1 |
Sm_D1 |
2..93 |
CDD:212471 |
26/89 (29%) |
| CG10418 | NP_648570.1 |
LSm2 |
2..90 |
CDD:212472 |
26/89 (29%) |
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