Protein Alignment SmD1 and SmD3

DIOPT Version :10

• Sequence 1: NP_524774.1
• Gene: SmD1 / 44668
• FlyBaseID: FBgn0261933
• Length: 124
• Species: Drosophila melanogaster
• Sequence 2: NP_725106.1
• Gene: SmD3 / 36306
• FlyBaseID: FBgn0023167
• Length: 151
• Species: Drosophila melanogaster
• Alignment Length: 123
• Identity: 40/123 - (32%)
• Similarity: 59/123 - (47%)
• Gaps: 20/123 - (16%)

  Fly     8 MKLSHET----VTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPVHLETLSIRGNNIRYF 68
            :|:.||.    :|.|...|....|.:...:..||..:..:.:|.::....:||.:.|||:.||:.
  Fly     7 IKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDGRTANLENVYIRGSKIRFL 71

  Fly    69 ILPDSLPLETLLIDDTPKSKTKKKDSGRVGNRGRGRGA--------RGRGGPRGRGRG 118
            ||||       ::.:.|..| |:...|..|..|||:.|        ||||||.|.|||
  Fly    72 ILPD-------MLKNAPMFK-KQTGKGLGGTAGRGKAAILRAQARGRGRGGPPGGGRG 121

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD1	NP_524774.1	Sm_D1	2..93	CDD:212471	24/88 (27%)
SmD3	NP_725106.1	Sm_D3	6..75	CDD:212468	19/67 (28%)