Protein Alignment SmD1 and snrpd3l

DIOPT Version :9

• Sequence 1: NP_524774.1
• Gene: SmD1 / 44668
• FlyBaseID: FBgn0261933
• Length: 124
• Species: Drosophila melanogaster
• Sequence 2: NP_956054.1
• Gene: snrpd3l / 327011
• ZFINID: ZDB-GENE-030131-5219
• Length: 128
• Species: Danio rerio
• Alignment Length: 124
• Identity: 40/124 - (32%)
• Similarity: 59/124 - (47%)
• Gaps: 24/124 - (19%)

  Fly     8 MKLSHET----VTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPVHLETLSIRGNNIRYF 68
            :|:.||.    ||.|...|....|.:...:..||..:.::.:|.::.....||.:.|||:.||:.
Zfish     7 IKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVSQLEQVYIRGSKIRFL 71

  Fly    69 ILPDSLPLETLLIDDTPKSKT-KKKDSGRVGNRGRGRGA----------RGRGGPRGRG 116
            ||||       ::.:.|..|: |.|:.|  ...|||:.|          ||||||.|||
Zfish    72 ILPD-------MLKNAPMLKSMKNKNQG--AGAGRGKAAILKAQVAARGRGRGGPGGRG 121

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD1	NP_524774.1	Sm_D1	2..93	CDD:212471	25/89 (28%)
snrpd3l	NP_956054.1	Sm_D3	6..75	CDD:212468	20/67 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810