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Protein Alignment SmD1 and Snrpd1
DIOPT Version :9
Sequence 1: | NP_524774.1 |
Gene: | SmD1 / 44668 |
FlyBaseID: | FBgn0261933 |
Length: | 124 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001099633.1 |
Gene: | Snrpd1 / 291794 |
RGDID: | 1306345 |
Length: | 119 |
Species: | Rattus norvegicus |
Alignment Length: | 124 |
Identity: | 98/124 - (79%) |
Similarity: | 110/124 - (88%) |
Gaps: | 5/124 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MKLVRFLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPVHLETLSIRGNNI 65
||||||||||||||||||||||||:|||||||||:||||||:|:||:|||:||.|||||||||||
Rat 1 MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGNNI 65
Fly 66 RYFILPDSLPLETLLIDDTPKSKTKKKDSGRVGNRGRGRGARGRGGPRGRGRGRASGRR 124
|||||||||||:|||:|..||.|:||::: |..|||||| |||| |||||||...||
Rat 66 RYFILPDSLPLDTLLVDVEPKVKSKKREA--VAGRGRGRG-RGRG--RGRGRGRGGPRR 119
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
SmD1 | NP_524774.1 |
Sm_D1 |
2..93 |
CDD:212471 |
77/90 (86%) |
Snrpd1 | NP_001099633.1 |
Sm_D1 |
2..93 |
CDD:212471 |
77/90 (86%) |
Information from Original Tools:
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