Protein Alignment SmD1 and Snrpd1

DIOPT Version :10

• Sequence 1: NP_524774.1
• Gene: SmD1 / 44668
• FlyBaseID: FBgn0261933
• Length: 124
• Species: Drosophila melanogaster
• Sequence 2: NP_033252.1
• Gene: Snrpd1 / 20641
• MGIID: 98344
• Length: 119
• Species: Mus musculus
• Alignment Length: 124
• Identity: 98/124 - (79%)
• Similarity: 110/124 - (88%)
• Gaps: 5/124 - (4%)

  Fly     1 MKLVRFLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPVHLETLSIRGNNI 65
            ||||||||||||||||||||||||:|||||||||:||||||:|:||:|||:||.|||||||||||
Mouse     1 MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGNNI 65

  Fly    66 RYFILPDSLPLETLLIDDTPKSKTKKKDSGRVGNRGRGRGARGRGGPRGRGRGRASGRR 124
            |||||||||||:|||:|..||.|:||:::  |..|||||| ||||  |||||||...||
Mouse    66 RYFILPDSLPLDTLLVDVEPKVKSKKREA--VAGRGRGRG-RGRG--RGRGRGRGGPRR 119

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD1	NP_524774.1	Sm_D1	2..93	CDD:212471	77/90 (86%)
Snrpd1	NP_033252.1	Sufficient for interaction with CLNS1A. /evidence=ECO:0000250	1..80		70/78 (90%)
		Sm_D1	2..93	CDD:212471	77/90 (86%)
		Required for interaction with SMN1. /evidence=ECO:0000250|UniProtKB:P62314	69..119		35/54 (65%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	88..119		21/35 (60%)