Protein Alignment SmD1 and Snrpb

DIOPT Version :9

• Sequence 1: NP_524774.1
• Gene: SmD1 / 44668
• FlyBaseID: FBgn0261933
• Length: 124
• Species: Drosophila melanogaster
• Sequence 2: NP_033251.1
• Gene: Snrpb / 20638
• MGIID: 98342
• Length: 231
• Species: Mus musculus
• Alignment Length: 110
• Identity: 28/110 - (25%)
• Similarity: 41/110 - (37%)
• Gaps: 27/110 - (24%)

  Fly    19 LKNGTQIHGTITGVDVAMNTHL-----------KSVRMTIKNRDPVHLETLSIRGNNIRYFILPD 72
            |::|....||....|..||..|           |:.:...:....| |..:.:||.|
Mouse    21 LQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRV-LGLVLLRGEN-------- 76

  Fly    73 SLPLETLLIDDTPKSKT---KKKDSGRVGNRGRGRGARGRGGPRG 114
               |.::.::..|...|   :...:|..|..|.||.| |||.|.|
Mouse    77 ---LVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAA-GRGIPAG 117

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD1	NP_524774.1	Sm_D1	2..93	CDD:212471	17/87 (20%)
Snrpb	NP_033251.1	Sm_B	5..83	CDD:212464	15/73 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	163..231
		Repeat-rich region	175..228

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900