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Protein Alignment SmD1 and gut-2
DIOPT Version :10
| Sequence 1: | NP_524774.1 |
Gene: | SmD1 / 44668 |
FlyBaseID: | FBgn0261933 |
Length: | 124 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001256511.1 |
Gene: | gut-2 / 179833 |
WormBaseID: | WBGene00001808 |
Length: | 97 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 97 |
Identity: | 32/97 - (32%) |
| Similarity: | 44/97 - (45%) |
Gaps: | 6/97 - (6%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MKLVRFLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDP--VHLETLSIRGN 63
|....|...|..:.|.:||||...|.||:..||..:|..|..:.::...|.| |.::...|||:
Worm 1 MLFFSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNMKLTDITVSDPERFPHMVSVKNCFIRGS 65
Fly 64 NIRYFILPDSLPLETLLIDDTPK----SKTKK 91
.:||..||.......||.|...| ||.|:
Worm 66 VVRYVQLPSDQVDTQLLADSCRKELLDSKAKQ 97
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmD1 | NP_524774.1 |
Sm_D1 |
2..93 |
CDD:212471 |
31/96 (32%) |
| gut-2 | NP_001256511.1 |
LSm2 |
2..90 |
CDD:212472 |
28/87 (32%) |
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