Protein Alignment SmD1 and snr-3

DIOPT Version :10

• Sequence 1: NP_524774.1
• Gene: SmD1 / 44668
• FlyBaseID: FBgn0261933
• Length: 124
• Species: Drosophila melanogaster
• Sequence 2: NP_495306.1
• Gene: snr-3 / 174072
• WormBaseID: WBGene00004916
• Length: 126
• Species: Caenorhabditis elegans
• Alignment Length: 123
• Identity: 86/123 - (69%)
• Similarity: 98/123 - (79%)
• Gaps: 3/123 - (2%)

  Fly     1 MKLVRFLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPVHLETLSIRGNNI 65
            |||||||||||||||.||||||||:.|||.||||||||||::|.||:||::||.|:|||||||||
 Worm     1 MKLVRFLMKLSHETVNIELKNGTQVSGTIMGVDVAMNTHLRAVSMTVKNKEPVKLDTLSIRGNNI 65

  Fly    66 RYFILPDSLPLETLLIDDTPKSKTKKKDSGRVGNRGRGRGARGRGGPRGRGRGRASGR 123
            ||.||||.|.|:||||||.|:.|.:...:|  .:||||||.. |||..||||||...|
 Worm    66 RYIILPDPLALDTLLIDDEPRKKARAARAG--ASRGRGRGGM-RGGRGGRGRGRGGPR 120

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD1	NP_524774.1	Sm_D1	2..93	CDD:212471	68/90 (76%)
snr-3	NP_495306.1	Sm_D1	2..88	CDD:212471	67/85 (79%)