DRSC/TRiP Functional Genomics Resources

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Protein Alignment wech and Trim71

DIOPT Version :10

Sequence 1:NP_524772.2 Gene:wech / 44653 FlyBaseID:FBgn0259745 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_001035968.1 Gene:Trim71 / 636931 MGIID:2685973 Length:855 Species:Mus musculus


Alignment Length:905 Identity:272/905 - (30%)
Similarity:404/905 - (44%) Gaps:184/905 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QQMASSNAPSANNVAHSSTANGSGGGSVSSNASNSSERLL------------------------A 52
            ::|..|.||.::|.:.||:::.:...|.......::.|.|                        |
Mouse    16 KEMCGSPAPLSSNSSASSSSSQTSTSSAGGGGPGAAARRLHVLPCLHAFCRPCLEAHRLPAPGGA 80

  Fly    53 GILESF----PAWDLNVGLLPNVGQSSPPRADFFINNFLGGL--------DTHGDFSIGPIGSGA 105
            |..|:.    |..|..|.|....|..:.|.:.|.::|.|..:        ..:|....||.|:|.
Mouse    81 GPAEALKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLLDAVVATAEEPPPKNGRAGGGPGGAGG 145

  Fly   106 RSN------------------PKMSPESSNNSSI-----SCGWCEV--SASIRCLECNEFMCNDC 145
            .||                  |...|.:|..|.:     .|..|:.  :||.|||:|.|.:|::|
Mouse   146 HSNHRHHAHHPAQRAAAPAPQPPPGPAASPGSLLMRRPHGCSSCDEGNAASSRCLDCQEHLCDNC 210

  Fly   146 LREHRNSPLSSNHSIV-SLPTPIGAS---------PTGGS--SVNAQTPPSGNFICDIH-NEMLR 197
            :|.|:...|:.:|.|. ..|.|..||         |..|:  |:.:..|....| |..| :|:|.
Mouse   211 VRAHQRVRLTKDHYIERGPPGPAAASAAQQLGLGPPFAGAPFSILSVFPERLGF-CQHHDDEVLH 274

  Fly   198 YVCDYCRKLVCQCCTLHEHKEHSYASIQSFMVGSKEKLEGAIESSQVGTRCIKSSIDKALAFIRL 262
            ..||.|...:|:.|||..|..||:|.:|..:..|:......:..:|.|.:.::.||::|......
Mouse   275 LYCDTCSVPICRECTLGRHGGHSFAYLQDALQDSRALTIQLLADAQQGRQALQLSIEQAQTVAEQ 339

  Fly   263 IERNCSELSDNIRKAFRQFIIAIEDRERFLLDFVEKLRQRRLAILHDQMAGLKSALAGLSETSDM 327
            :|.....:...::....:...|:||||..||..|||:||.:...|..|:..|:.:|:.|..|...
Mouse   340 VEMKAKVVQSEVKAVTARHKKALEDRECELLWKVEKIRQVKAKSLFLQVEKLRQSLSKLESTISA 404

  Fly   328 LSKVADNACNMDQIEIAMKLTNGQRQMEQFAGIYKDLQPKQ-EVFAFAPPDYSLLQDIRNQGGVI 391
            :.:|.:....:|.:....::....::::...|:   |||:: :...|.|||.:|...:::.|.| 
Mouse   405 VQQVLEEGRALDILLARDRMLAQVQELKTIRGL---LQPQEDDRIMFTPPDQALYLALKSIGFV- 465

  Fly   392 LVDDKNLPIVSSSNGIVPSVSSV-NAVAAASVGVVGGVAGVVG----GVGVSNGLDL-------- 443
                       ||....|...:. :.:..|..|.|.... |:|    |....:|.||        
Mouse   466 -----------SSGAFAPLTKATGDGIKRALQGKVASFT-VMGYDHDGEPRHSGGDLMSVVVLGP 518

  Fly   444 ---AFGMNMPN--NPLSVASSSVRRPLLR--------------DNSFRIPSPIMQPRGGSACGMS 489
               .||..:.:  |...:.|   .||.|.              :||   |..::...|.|..|: 
Mouse   519 DGNLFGAEVSDQQNGTYIVS---YRPQLEGEHLVSVTLYNQHIENS---PFKVVVKSGRSYVGI- 576

  Fly   490 SGMSSAALDWELNGLRSSPGLHFSAPRTTQAIPGCMDLVKVRNSNALSLSFATEGHEDGQVSRPW 554
                                          .:||              |||.:||..:|::.|||
Mouse   577 ------------------------------GLPG--------------LSFGSEGDGEGKLCRPW 597

  Fly   555 GLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGICVDVDNRIIVVDKDNH 619
            |:.|||.|.::|:||.|||:|||.|.||...|||..|...|:||.|||:..|...||||.|||||
Mouse   598 GVSVDKEGFIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIIVADKDNH 662

  Fly   620 RVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRNHRIQQFDSEGRFIRQIVFD 684
            |:||||..|.||||||..|.:.|||.|||||||||..:|:|:|:||||||.|..:|.|:.:..|:
Mouse   663 RIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFE 727

  Fly   685 NHGQTKGIASPRGVCYTPTGNIIVSDFDNHCLYLIDPDINDILSVKGHEGSGFHEFNRPSGLCCD 749
            . ...|...|||||.:...|:::|:||:||.|.:|.||......: |.||||..:|.||.|:..|
Mouse   728 G-SLWKHFDSPRGVAFNNEGHLVVTDFNNHRLLVIHPDCQSARFL-GSEGSGNGQFLRPQGVAVD 790

  Fly   750 DEGRIIVADSKNQRILVFNQNLDFMWDIEVRPSINPLMPPTLDEKDRTCDVAIMPDGRIV 809
            .|||||||||:|.|:.:|..|..|:.....:.|       ...:.||...:|:.|||.||
Mouse   791 QEGRIIVADSRNHRVQMFEANGSFLCKFGAQGS-------GFGQMDRPSGIAVTPDGLIV 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wechNP_524772.2 Bbox1 123..163 CDD:380815 16/42 (38%)
Bbox2_TRIM66-like 187..228 CDD:380852 17/41 (41%)
CC_brat-like 232..343 CDD:475168 26/110 (24%)
NHL_TRIM71_like 528..810 CDD:271324 133/282 (47%)
NHL repeat 553..592 CDD:271324 22/38 (58%)
NHL repeat 600..639 CDD:271324 25/38 (66%)
WD40 repeat 603..640 CDD:293791 23/36 (64%)
WD40 repeat 647..684 CDD:293791 20/36 (56%)
NHL repeat 647..683 CDD:271324 20/35 (57%)
WD40 repeat 692..736 CDD:293791 18/43 (42%)
NHL repeat 692..733 CDD:271324 16/40 (40%)
NHL repeat 742..772 CDD:271324 17/29 (59%)
WD40 repeat 743..767 CDD:293791 14/23 (61%)
Trim71NP_001035968.1 RING-HC_TRIM71_C-VII 1..101 CDD:438251 17/84 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..48 4/21 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..177 10/49 (20%)
Bbox1_TRIM71_C-VII 185..227 CDD:380870 16/41 (39%)
Bbox2_TRIM71_C-VII 264..309 CDD:380854 17/45 (38%)
CC_brat-like 314..429 CDD:475168 26/114 (23%)
Filamin 466..567 22/107 (21%)
Filamin 469..564 CDD:395505 20/101 (20%)
NHL_TRIM71_like 571..855 CDD:271324 137/327 (42%)
NHL 1 580..623 24/56 (43%)
NHL repeat 596..635 CDD:271324 22/38 (58%)
NHL 2 627..670 25/42 (60%)
NHL repeat 643..682 CDD:271324 25/38 (66%)
NHL 3 674..717 28/42 (67%)
NHL repeat 690..726 CDD:271324 20/35 (57%)
WD40 repeat 691..727 CDD:293791 19/35 (54%)
NHL 4 721..764 15/43 (35%)
NHL repeat 734..774 CDD:271324 16/40 (40%)
WD40 repeat 737..774 CDD:293791 15/37 (41%)
NHL 5 768..811 22/43 (51%)
WD40 repeat 782..821 CDD:293791 18/38 (47%)
NHL repeat 783..813 CDD:271324 17/29 (59%)
NHL 6 815..855 9/36 (25%)
NHL repeat 829..855 CDD:271324 8/15 (53%)
WD40 repeat 831..855 CDD:293791 6/13 (46%)

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