DRSC/TRiP Functional Genomics Resources

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Protein Alignment wech and TRIM42

DIOPT Version :10

Sequence 1:NP_524772.2 Gene:wech / 44653 FlyBaseID:FBgn0259745 Length:832 Species:Drosophila melanogaster
Sequence 2:XP_011511042.1 Gene:TRIM42 / 287015 HGNCID:19014 Length:727 Species:Homo sapiens


Alignment Length:81 Identity:22/81 - (27%)
Similarity:31/81 - (38%) Gaps:17/81 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VCMVAMATVVERRRRFNINDKIKEL-----GTLLPKNMEGS--------SSELNGKDG--RVNKG 63
            ||....:...:.|...::|:  .||     |....:|:|||        :.|.:...|  |....
Human  1229 VCQQGFSISADGRTCEDVNE--CELLSGVCGEAFCENVEGSFLCVCADENQEYSPMTGQCRSRTS 1291

  Fly    64 TILKGTVDYVKELKLE 79
            |.|...||..||.|.|
Human  1292 TDLDVDVDQPKEEKKE 1307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wechNP_524772.2 Bbox1 123..163 CDD:380815
Bbox2_TRIM66-like 187..228 CDD:380852
CC_brat-like 232..343 CDD:475168
NHL_TRIM71_like 528..810 CDD:271324
NHL repeat 553..592 CDD:271324
NHL repeat 600..639 CDD:271324
WD40 repeat 603..640 CDD:293791
WD40 repeat 647..684 CDD:293791
NHL repeat 647..683 CDD:271324
WD40 repeat 692..736 CDD:293791
NHL repeat 692..733 CDD:271324
NHL repeat 742..772 CDD:271324
WD40 repeat 743..767 CDD:293791
TRIM42XP_011511042.1 NosR <4..81 CDD:443108
RING-HC_TRIM42_C-III 139..196 CDD:438240
Bbox_SF 235..280 CDD:469587
Bbox2_TRIM42_C-III 287..326 CDD:380840
CC_brat-like <369..452 CDD:475168
FN3 612..692 CDD:238020
Blue background indicates that the domain is not in the aligned region.

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