DRSC/TRiP Functional Genomics Resources

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Protein Alignment wech and trim-21

DIOPT Version :10

Sequence 1:NP_524772.2 Gene:wech / 44653 FlyBaseID:FBgn0259745 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_001408272.1 Gene:trim-21 / 181901 WormBaseID:WBGene00015114 Length:307 Species:Caenorhabditis elegans


Alignment Length:247 Identity:44/247 - (17%)
Similarity:74/247 - (29%) Gaps:105/247 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 RCLECNEFMCNDCLRE--------------------------HRNSPLSSNHSIVSLPTPIGASP 171
            |.|:|:..:|..|:::                          |:|..|.....||:..|.:..:.
 Worm    39 RNLKCSHTLCEGCIKKLLKNGRVVCPFCREPTEVPVYNIKSLHKNFSLIQMIKIVTKTTEVEKNW 103

  Fly   172 TGGSSVNAQTPPS--------GNFICDIHNEMLRYVCDYCRKLVCQCC-TLHEHKEHS------- 220
            .       ..||.        ..|.|...|      |....||:||.| ....||.|:       
 Worm   104 D-------NFPPKCVEHPYNVAEFACIESN------CSSKNKLMCQTCEEFGAHKGHAKELLITK 155

  Fly   221 ---------------YASIQSFMVGSKEKLEGAIESSQ---VGTRCIKSSIDKALAFIRLIERNC 267
                           ..:||:..|...|..|..::|.|   :..:.||:..||            
 Worm   156 TDKFRKKLEFWINQLKLNIQNCTVKKNELEEAVVKSEQLLNIKVKKIKNHFDK------------ 208

  Fly   268 SELSDNIRKAFRQFIIAIEDRERFLLD-------FVEKLRQRRLAILHDQMA 312
                      .||   :::.:|:.::|       .::|....::..|.|..|
 Worm   209 ----------IRQ---SVDKKEKGIIDETTAEATRIQKFNNEKITYLIDLQA 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wechNP_524772.2 Bbox1 123..163 CDD:380815 10/55 (18%)
Bbox2_TRIM66-like 187..228 CDD:380852 14/63 (22%)
CC_brat-like 232..343 CDD:475168 16/91 (18%)
NHL_TRIM71_like 528..810 CDD:271324
NHL repeat 553..592 CDD:271324
NHL repeat 600..639 CDD:271324
WD40 repeat 603..640 CDD:293791
WD40 repeat 647..684 CDD:293791
NHL repeat 647..683 CDD:271324
WD40 repeat 692..736 CDD:293791
NHL repeat 692..733 CDD:271324
NHL repeat 742..772 CDD:271324
WD40 repeat 743..767 CDD:293791
trim-21NP_001408272.1 RING_Ubox 19..67 CDD:473075 5/27 (19%)
Bbox2_TRIM23_C-IX_rpt2 106..152 CDD:380832 14/51 (27%)
PRK00409 <150..>264 CDD:234750 19/123 (15%)
Blue background indicates that the domain is not in the aligned region.

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