DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wech and F43C11.8

DIOPT Version :10

Sequence 1:NP_524772.2 Gene:wech / 44653 FlyBaseID:FBgn0259745 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_494244.2 Gene:F43C11.8 / 173590 WormBaseID:WBGene00018385 Length:323 Species:Caenorhabditis elegans


Alignment Length:318 Identity:64/318 - (20%)
Similarity:107/318 - (33%) Gaps:106/318 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 SSISCGWCEVSASI-------RCLECNEFMCNDCLREHRNSPLSSNHSIVSLPTPIGASPTGGSS 176
            |.|.|..|....|.       |.|.|...:|:.|..:     |..|..|:   .|.....|..|:
 Worm     2 SFIECEICNEDFSSATDENIPRILRCGHTICHGCAEK-----LLQNSMIL---CPFCREATNVST 58

  Fly   177 V--------------NAQT----------PPS--------GNFICDIHNEMLRYVCDYCRKLVCQ 209
            |              :|:|          ||.        ..|:|      :...|....||:|:
 Worm    59 VKDLQKNFALLQAVEHAKTRTEEKDPIDSPPKCASHQYNFAEFVC------IEPTCSSSDKLMCR 117

  Fly   210 CC-TLHEHKEHSYASIQSFMVGSKEKLEGAIESSQVGTRCIKSSIDKALAFIRLIERNCSELSDN 273
            .| ....|..|:...:||.....::.|.|.:..|:          |.|           |::..|
 Worm   118 TCEEFGAHAGHNRGLLQSEAAKLRQFLSGKLSRSE----------DLA-----------SKIDAN 161

  Fly   274 IRKAFRQFIIAIEDRERF------LLDFVEKLRQRRLAILHDQMAGLKSALAGLSETSDMLSKVA 332
            |.|.....:..::|.|.|      ::.|...:|:...|:.:|.:|.|::.......|:|:|....
 Worm   162 IEKIGTAQLTNLDDGEVFQEKKVSIIAFYASIRETLDALENDALATLQNIAETNFFTNDLLIAEL 226

  Fly   333 DNACNMD-----QIEIAMKLTNG--------------QRQMEQFAGIYKDLQPKQEVF 371
            ..:.|..     ::::.||::|.              .....:||    |::|  |||
 Worm   227 SESLNRQKRKSAELKLFMKMSNADLLAVNSALEVSSENELWTEFA----DVEP--EVF 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wechNP_524772.2 Bbox1 123..163 CDD:380815 11/46 (24%)
Bbox2_TRIM66-like 187..228 CDD:380852 11/41 (27%)
CC_brat-like 232..343 CDD:475168 22/121 (18%)
NHL_TRIM71_like 528..810 CDD:271324
NHL repeat 553..592 CDD:271324
NHL repeat 600..639 CDD:271324
WD40 repeat 603..640 CDD:293791
WD40 repeat 647..684 CDD:293791
NHL repeat 647..683 CDD:271324
WD40 repeat 692..736 CDD:293791
NHL repeat 692..733 CDD:271324
NHL repeat 742..772 CDD:271324
WD40 repeat 743..767 CDD:293791
F43C11.8NP_494244.2 RING_Ubox 3..54 CDD:473075 13/58 (22%)
Bbox2_TRIM23_C-IX_rpt2 88..137 CDD:380832 13/54 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.