DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wech and tn

DIOPT Version :10

Sequence 1:NP_524772.2 Gene:wech / 44653 FlyBaseID:FBgn0259745 Length:832 Species:Drosophila melanogaster
Sequence 2:XP_308626.5 Gene:tn / 1269971 VectorBaseID:AGAMI1_013811 Length:1351 Species:Anopheles gambiae


Alignment Length:884 Identity:208/884 - (23%)
Similarity:322/884 - (36%) Gaps:235/884 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SNNSVPQQMASSNAPSANNVAHSSTANGSGGGSVSSNASNSSERLLAGILESFPAWDLNV---GL 67
            ||....:|.:..:.|:|.  |.::|...|...|.||.:::|||......:.:....|..|   .:
Mosquito   581 SNRRTARQTSVGSKPAAG--AAAATKKSSVTRSASSESNSSSESSSPSPVPASTRTDPEVKPKTI 643

  Fly    68 LPNVGQSSPPRADFFINNFLGGLDTHGDFSIGPIGS--------GARSNPKMSPESSNNSSISCG 124
            |.|..:::..|         .|..:..:.:..|..|        .|::.|:...||.::|.    
Mosquito   644 LKNANENASQR---------NGTASPTETAKKPFQSRFLPQTQPPAQTAPEKKEESESSSE---- 695

  Fly   125 WCEVSASIRCLECNEFMCNDCLREHRNSPLSSNHSIVSLPTPIGA-------SP----TGGSSVN 178
              |.|:|....|..|       .|....|.::       |.|..|       ||    |..|...
Mosquito   696 --EESSSEEESEEEE-------EEEEEKPAAA-------PAPAAAANSTARSSPITTTTSSSRTT 744

  Fly   179 AQTPPSGNF-----------ICDIHNEMLRYVCDYCRKLVCQCCTLHEHKEHSYASIQSFMVGSK 232
            ..||.|..|           ......:.||....|...      |.:..:.| |...:|...||.
Mosquito   745 HDTPSSPLFGRVSRQDSSDSTRKSSRDELRTSSGYSSP------TSYRSQNH-YERDESPKYGSS 802

  Fly   233 EKLEGAIESSQVGTRCIKSSIDKALAFIRLIERNCSELSDN------------IRKAFRQFIIAI 285
            .....|:.|....                    :.:|..||            :.|:....::|.
Mosquito   803 SSGSSALRSRTTS--------------------HAAEPEDNKYGSGSGYTSRFLNKSKSTAVVAP 847

  Fly   286 ED--------------RERFLLDFVEKLRQRRLAILHDQMA------------------------ 312
            ||              |.||     ..|:.||..:...:.:                        
Mosquito   848 EDDATDDSDSRYGAGGRSRF-----TALQDRRTRLARSRSSHNFGNDDEEDEPVSPTTTSPSAYL 907

  Fly   313 ----GLKSALAGLSETSDMLSKVADNACNMDQIEIAMKLTNGQRQMEQFAGIYKDLQPKQE---V 370
                |..|:||  |:.||:....:.:|                         .|..:|..|   .
Mosquito   908 ASRYGASSSLA--SQPSDLSRSRSTHA-------------------------LKSREPSPERNST 945

  Fly   371 FAFAPPDYSLLQD----IRNQ-GGVILVDDKNLPIVSSSNGIVPSVSSVNAVAAASVGVVGGVAG 430
            .|....|.:.|..    ::|: |.....|.|:.|..|||...:.|.|..:..:|:|.....|.:.
Mosquito   946 GAGGDKDGAALSSWARYLKNKYGNRTTKDGKDSPSSSSSTSGLGSSSLSSPSSASSSSATSGSSA 1010

  Fly   431 VVGGVG--VSNGL------------DLAFGMNMPNNPLSVASSSVRRPLLRDNSFRIPSPIMQPR 481
            ......  :|.||            |...|:..|.:|.:.|::....|                 
Mosquito  1011 SASAAARRLSLGLPLRQTDLLSSDDDSKNGVGSPTSPTAAAAAVAGIP----------------- 1058

  Fly   482 GGSACGMS---SGMSSAALDWELNGLRSSPGLHFSAPRTTQAIP--------GCMDLVKVRNSNA 535
              .|.|||   ..:......:::.|..|.|| .|:.||.....|        .....|:|.:||.
Mosquito  1059 --GAAGMSPRTQYLQKRRQLFQIGGRGSEPG-SFTWPRGIAVGPDNSIVVADSSNHRVQVFDSNG 1120

  Fly   536 LSL-SFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDL 599
            :.: .|...|:.||:.....|:.|:::|..:::||.|:|:||.:|.|.....||.:|..:|:|:.
Mosquito  1121 IFVKEFGQYGNGDGEFDCLAGVAVNRIGQFIIADRYNHRIQVLDPAGRFLRSFGSQGTTDGKFNY 1185

  Fly   600 PAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSR 664
            |.||..|....|.|.||:|||:|:|.:.|.|:.|||:.|||.||.::|..:||::..:::|:||.
Mosquito  1186 PWGITTDALGFIYVCDKENHRIQVFQSDGSFIGKFGTCGKEKGQLEHPHYIAVSNTNRVIVSDSN 1250

  Fly   665 NHRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCLYLIDPDINDILS 728
            |||:|.||..||.:  ..|...|..:| ...||||.....|.|.|:|..|:.:.:..|| ...|.
Mosquito  1251 NHRVQIFDVNGRVL--TTFGGEGSEEGQFKFPRGVAVDDQGYICVADSGNNRIQIFHPD-GSFLR 1312

  Fly   729 VKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 767
            ..|..|||..||....|:.....|.|:|.|.:|.|:.||
Mosquito  1313 AFGSWGSGDAEFKGLEGVAIMSNGNILVCDRENHRVQVF 1351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wechNP_524772.2 Bbox1 123..163 CDD:380815 7/39 (18%)
Bbox2_TRIM66-like 187..228 CDD:380852 8/51 (16%)
CC_brat-like 232..343 CDD:475168 23/164 (14%)
NHL_TRIM71_like 528..810 CDD:271324 91/242 (38%)
NHL repeat 553..592 CDD:271324 13/38 (34%)
NHL repeat 600..639 CDD:271324 18/38 (47%)
WD40 repeat 603..640 CDD:293791 17/36 (47%)
WD40 repeat 647..684 CDD:293791 14/36 (39%)
NHL repeat 647..683 CDD:271324 14/35 (40%)
WD40 repeat 692..736 CDD:293791 14/43 (33%)
NHL repeat 692..733 CDD:271324 13/40 (33%)
NHL repeat 742..772 CDD:271324 9/26 (35%)
WD40 repeat 743..767 CDD:293791 7/23 (30%)
tnXP_308626.5 None

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