DRSC/TRiP Functional Genomics Resources

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Protein Alignment wech and si:dkey-106l3.6

DIOPT Version :10

Sequence 1:NP_524772.2 Gene:wech / 44653 FlyBaseID:FBgn0259745 Length:832 Species:Drosophila melanogaster
Sequence 2:XP_003199368.2 Gene:si:dkey-106l3.6 / 100526811 ZFINID:ZDB-GENE-091204-159 Length:261 Species:Danio rerio


Alignment Length:148 Identity:31/148 - (20%)
Similarity:47/148 - (31%) Gaps:58/148 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 RSNPKMSPESSNNSS-------ISCGWCEVSASI-----RCLECNEFMCNDCLR----------- 147
            ||:...|..||.:|.       :.|..|..:.:.     |.|.|...:|.:||:           
Zfish   122 RSSSTSSSSSSTSSGPVMPCEPLDCPTCGHTYNFAGKRPRILSCLHSVCEECLQILYESCPKYKF 186

  Fly   148 --------------EHRNSPLSSNHSIVSL--PTPIGASPTGGSSVNAQTPPSGNFICDIHNEML 196
                          ::..:.|:.|.||:|.  |.|.|....|.         .|:..|      .
Zfish   187 ISCPTCRRETVLFTDYGLAALAINTSILSRLPPDPAGTVQWGS---------DGDRSC------Y 236

  Fly   197 RYVCDYCRKLVCQCCTLH 214
            :.|..||:    ..||.|
Zfish   237 QTVRQYCQ----SACTCH 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wechNP_524772.2 Bbox1 123..163 CDD:380815 12/69 (17%)
Bbox2_TRIM66-like 187..228 CDD:380852 7/28 (25%)
CC_brat-like 232..343 CDD:475168
NHL_TRIM71_like 528..810 CDD:271324
NHL repeat 553..592 CDD:271324
NHL repeat 600..639 CDD:271324
WD40 repeat 603..640 CDD:293791
WD40 repeat 647..684 CDD:293791
NHL repeat 647..683 CDD:271324
WD40 repeat 692..736 CDD:293791
NHL repeat 692..733 CDD:271324
NHL repeat 742..772 CDD:271324
WD40 repeat 743..767 CDD:293791
si:dkey-106l3.6XP_003199368.2 RING-HC_RNF208 143..198 CDD:438221 8/54 (15%)
Blue background indicates that the domain is not in the aligned region.

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