DRSC/TRiP Functional Genomics Resources

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Protein Alignment wech and nhlrc3

DIOPT Version :10

Sequence 1:NP_524772.2 Gene:wech / 44653 FlyBaseID:FBgn0259745 Length:832 Species:Drosophila melanogaster
Sequence 2:XP_002936773.2 Gene:nhlrc3 / 100497010 XenbaseID:XB-GENE-988782 Length:344 Species:Xenopus tropicalis


Alignment Length:309 Identity:73/309 - (23%)
Similarity:108/309 - (34%) Gaps:77/309 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   515 PRTTQAIPGCMDLVKVRNSNAL------------SLSFATEGHEDGQ-----VSRPWGL---CVD 559
            |:......|....|.|..:|:|            .|.|..||:...|     :..|.|:   ..|
 Frog    56 PKNADYFTGVTFGVAVDPTNSLVYVAQRGENVSKVLVFTEEGYFKQQWNTDSIDMPHGIFAVSTD 120

  Fly   560 KMGHVLVSD----RRNNRVQVFNPDGSLKFKFGRKGVGNG-----EFDLPAGICVDVDNRIIVVD 615
            |...:.::|    ...:.|:.::|.|.|....|..|....     :||.||.|.|:....:.:||
 Frog   121 KEHSIWITDVGQGNFGHTVKKYSPSGKLLQVLGTAGKSGSALDPLQFDQPAEIFVENSGDLYIVD 185

  Fly   616 KD---NHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRNHRIQQFDSEGRF 677
            .|   |:|:..||.....|...|..|.:.|||..|..|.|:...::.|.|..|.|:|.||.    
 Frog   186 GDGGLNNRILKFTKDFWLLWTLGGRGTKPGQFFIPHSVTVDEVGRVWVADRGNKRMQAFDK---- 246

  Fly   678 IRQIVFDNHGQTKGIASPRGVCYTPTG-----------NIIVSDFD-NHCLYLIDPDINDILSVK 730
                   ..|:..|..|.   |:|..|           ..:|:..: |..|:|..|.|..|    
 Frog   247 -------TSGEWIGTWSS---CFTEDGPYSVRLTADKQYFVVAQLNINRVLFLSVPPIGSI---- 297

  Fly   731 GHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVFNQNLDFMWDIEV 779
               |.            |.....|.:||.....::..|.|...|:..|:
 Frog   298 ---GD------------CHVASAIQMADGVKPHLVDVNINTGSMYVAEI 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wechNP_524772.2 Bbox1 123..163 CDD:380815
Bbox2_TRIM66-like 187..228 CDD:380852
CC_brat-like 232..343 CDD:475168
NHL_TRIM71_like 528..810 CDD:271324 71/296 (24%)
NHL repeat 553..592 CDD:271324 10/45 (22%)
NHL repeat 600..639 CDD:271324 13/41 (32%)
WD40 repeat 603..640 CDD:293791 12/39 (31%)
WD40 repeat 647..684 CDD:293791 10/36 (28%)
NHL repeat 647..683 CDD:271324 10/35 (29%)
WD40 repeat 692..736 CDD:293791 12/55 (22%)
NHL repeat 692..733 CDD:271324 11/52 (21%)
NHL repeat 742..772 CDD:271324 6/29 (21%)
WD40 repeat 743..767 CDD:293791 4/23 (17%)
nhlrc3XP_002936773.2 NHL 52..340 CDD:302697 73/309 (24%)
NHL repeat 65..105 CDD:271320 9/39 (23%)
NHL repeat 111..157 CDD:271320 10/45 (22%)
NHL repeat 170..209 CDD:271320 12/38 (32%)
NHL repeat 217..254 CDD:271320 12/47 (26%)
NHL repeat 262..308 CDD:271320 11/64 (17%)
NHL repeat 314..339 CDD:271320 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.

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